FFCP PHASE1:Hg19::chr9:113342091..113342113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79987 | |EntrezGene=79987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15985 | |HGNC=15985 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQM1,Q4LDE5 | |UniProt=B3KQM1,Q4LDE5 | ||
|association_with_transcript=46bp_to_ENST00000374461,ENST00000401783,NM_153366,uc004beu.2,uc010mtz.2,uc010mua.1_5end | |association_with_transcript=46bp_to_ENST00000374461,ENST00000401783,NM_153366,uc004beu.2,uc010mtz.2,uc010mua.1_5end | ||
|cluster_id=chr9:113342091..113342113,- | |||
|coexpression_cluster_id=C2935 | |||
|description=CAGE_peak_5_at_SVEP1_5end | |description=CAGE_peak_5_at_SVEP1_5end | ||
|id=chr9:113342091..113342113,- | |id=chr9:113342091..113342113,- | ||
|ontology_enrichment_celltype=CL:0000057!1.80e-14!75;CL:0000055!1.33e-10!180 | |ontology_enrichment_celltype=CL:0000057!1.80e-14!75;CL:0000055!1.33e-10!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.70e-09;13!CL:0002615;1.76e-07;3!CL:0002504;3.27e-07;3!CL:1000279;3.27e-07;3!CL:1000280;3.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.60e-08,15;CL:0000057,8.21e-08,76;CL:0002615,1.75e-07,3;CL:0002504,2.88e-07,3;CL:1000279,2.88e-07,3;CL:1000280,2.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.42e-10!115;UBERON:0000475!9.93e-10!365;UBERON:0004457!7.05e-09!12;UBERON:0000042!7.05e-09!12;UBERON:0000062!3.49e-08!511;UBERON:0000468!4.13e-08!659;UBERON:0000481!8.08e-07!347;UBERON:0003102!9.71e-07!95 | |ontology_enrichment_uberon=UBERON:0007023!9.42e-10!115;UBERON:0000475!9.93e-10!365;UBERON:0004457!7.05e-09!12;UBERON:0000042!7.05e-09!12;UBERON:0000062!3.49e-08!511;UBERON:0000468!4.13e-08!659;UBERON:0000481!8.08e-07!347;UBERON:0003102!9.71e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.89e-11;9!UBERON:0000042;3.89e-11;9!UBERON:0003688;6.15e-09;6!UBERON:0002358;6.15e-09;6!UBERON:0003684;6.15e-09;6!UBERON:0001178;6.15e-09;6!UBERON:0004905;1.41e-08;8!UBERON:0000982;1.41e-08;8!UBERON:0004770;1.41e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,3.50e-10,12;UBERON:0000042,3.50e-10,12;UBERON:0003688,6.25e-09,6;UBERON:0002358,6.25e-09,6;UBERON:0003684,6.25e-09,6;UBERON:0001178,6.25e-09,6;UBERON:0004905,2.09e-08,8;UBERON:0000982,2.09e-08,8;UBERON:0004770,2.09e-08,8 | |||
|phase1_expression=3.81524596468169,5.78071414505655,7.75249222527841,6.00439790118782,5.81049422755474,7.85104671690332,0,0,4.70134130759709,0,0,0,0.263766978228454,1.23766352960047,5.63375538737457,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.02290049474824,0.361439152384566,2.00535164254356,3.0417768981773,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,3.04541115870403,12.0471380714502,1.06400514659507,1.12135520028461,0,0.24666754841716,1.24484414159907,0.808264032418128,0.163461903113459,0.454072282934794,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.61246251376468,0.491337269247072,0.413303124703062,2.37600571456411,5.43987244412825,0,0,0,0.250237039743928,0.831192346452549,1.31693286264251,0.30648779579902,3.15499923703853,0.340296549480063,0,2.13557388818567,2.11931901159562,0.900273288253207,1.03052529238439,0.772921620136887,0.558350568994769,0.337552664482532,0.389748020644795,2.01947019395292,4.14224543890347,5.33431987502079,1.77504796258307,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,2.3218396401599,0,0.354920400119532,0.168584690078102,0.482022059766964,0,0.217879444092406,0.237270619111097,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,10.7296933755565,0,0.531876233169741,1.04007436911366,0,0,0,3.14551586047925,0,0.823240336780769,0,4.6200953336531,0,3.01439377059586,0,1.79951384127703,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,2.08575535922538,0,1.08506009479894,0,1.42743191037729,3.31175071571263,2.22568688486155,0.601892199455438,0,0,0,0,1.39013783148933,0,0,0,0,0,0,0,0,0.744323423456331,3.83654933220156,1.12264037773229,2.43464383585832,3.07024349440022,0.321707842287215,2.96836132889982,0,0,0,0,0,0,0,0,0.68888668898764,1.82091168006717,9.17870904715969,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,14.837905677272,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.413509717453592,0.644521469209642,3.19036726611303,0,0.267096106940212,0,0,0,0.10115778085555,0,1.88887408098384,0,0,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,6.29079639948622,0,1.71175595213568,0.318203247925937,0,6.65528093058265,4.94166653524899,3.41655966802491,0.202182481573316,0,0,2.43816869544795,0,0,0.545999645631943,3.39373036688911,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0.491245205065606,0,0,4.64436797654861,13.1717957183961,0.379473173765715,0.699869440489966,0,0,0,13.0859883079723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,1.39473591775749,0,0,0.818149460017238,0,0.311039587661807,0,0,0,1.38100767891707,0,0,0,0.278304294485554,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,2.21158519862449,0.295547618953547,0.658156191461918,0,0,1.30815439456455,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.14994833854341,0.611030144933625,0,0,0,0.337005664903385,4.01288823649394,0.937057782901357,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,3.1593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,1.26085721434945,0,1.35588444468319,0,0,0.189932387867636,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.821432273351958,0,0,0,0.279282401272254,0.916641696046735,0,0.199679000498991,0.429226048136571,0.669514372325618,0.671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.551639951094387,0.524545881349981,0,0,0.191915197319445,1.42939065274673,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0.258565912723101,0.13223260174269,0,0,2.66968531419237,0.471612915298998,3.72815149812476,1.9846640872478,0,0,0,2.72008901684737,0.7520696820681,0.612691153526923,0.655745261419609,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0.757612021100357,0.754703705257725,0,1.14420034198462,1.20984739010591,0,0.443565449968902,0,0,0.155262956876259,0.829412415681711,0,1.04349012362347,1.6528336989694,1.90402606084398,0,0.363697318405119,0.322231671127465,0,1.19428766609585,0,0,0,0,0,2.14441591374926,0,0,0,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0.622077260032973,0,0,0,0,0,0,0,0,0.954013051960256,0,0,11.6383061417926,8.57487336588961,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0.397832444232549,0.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| ||
|short_description=p5@SVEP1 | |short_description=p5@SVEP1 | ||
}} | }} |
Latest revision as of 03:34, 20 September 2015
Short description: | p5@SVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SVEP1_5end |
Coexpression cluster: | C2935_placenta_Mesenchymal_tridermal_sacrococcigeal_Synoviocyte_Smooth_Fibroblast |
Association with transcript: | 46bp_to_ENST00000374461, ENST00000401783, NM_153366, uc004beu.2, uc010mtz.2, uc010mua.1_5end |
EntrezGene: | SVEP1 |
HGNC: | 15985 |
UniProt: | B3KQM1Q4LDE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.60e-08 | 15 |
fibroblast | 8.21e-08 | 76 |
adipocyte of omentum tissue | 1.75e-07 | 3 |
enteric smooth muscle cell | 2.88e-07 | 3 |
smooth muscle cell of large intestine | 2.88e-07 | 3 |
smooth muscle cell of colon | 2.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 3.50e-10 | 12 |
serous membrane | 3.50e-10 | 12 |
omentum | 6.25e-09 | 6 |
peritoneum | 6.25e-09 | 6 |
abdominal cavity | 6.25e-09 | 6 |
visceral peritoneum | 6.25e-09 | 6 |
articulation | 2.09e-08 | 8 |
skeletal joint | 2.09e-08 | 8 |
articular system | 2.09e-08 | 8 |