FFCP PHASE1:Hg19::chr4:103422471..103422495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4790 | |EntrezGene=4790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |HGNC=7794 | ||
|TSSclassifier=strong | |||
|UniProt=P19838 | |UniProt=P19838 | ||
|association_with_transcript=0bp_to_ENST00000226574,ENST00000394820,NM_001165412,NM_003998,uc011cep.1,uc011ceq.1_5end | |association_with_transcript=0bp_to_ENST00000226574,ENST00000394820,NM_001165412,NM_003998,uc011cep.1,uc011ceq.1_5end | ||
|cluster_id=chr4:103422471..103422495,+ | |||
|description=CAGE_peak_2_at_NFKB1_5end | |description=CAGE_peak_2_at_NFKB1_5end | ||
|id=chr4:103422471..103422495,+ | |id=chr4:103422471..103422495,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.04e-18!140;CL:0002031!5.24e-13!124;CL:0000037!1.05e-12!172;CL:0000566!1.05e-12!172;CL:0000988!2.04e-12!182;CL:0002087!5.14e-12!119;CL:0002032!2.43e-11!165;CL:0000837!2.43e-11!165;CL:0002057!9.51e-10!42;CL:0000860!1.02e-09!45;CL:0000766!1.69e-09!76;CL:0000557!5.10e-09!71;CL:0002009!3.08e-07!65;CL:0000839!6.08e-07!70 | |ontology_enrichment_celltype=CL:0000738!2.04e-18!140;CL:0002031!5.24e-13!124;CL:0000037!1.05e-12!172;CL:0000566!1.05e-12!172;CL:0000988!2.04e-12!182;CL:0002087!5.14e-12!119;CL:0002032!2.43e-11!165;CL:0000837!2.43e-11!165;CL:0002057!9.51e-10!42;CL:0000860!1.02e-09!45;CL:0000766!1.69e-09!76;CL:0000557!5.10e-09!71;CL:0002009!3.08e-07!65;CL:0000839!6.08e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.68e-12;33!CL:0002057;4.68e-12;33!CL:0000473;1.39e-08;39!CL:0000234;1.39e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.10e-18,136;CL:0000037,6.29e-13,168;CL:0002031,8.65e-13,120;CL:0000988,1.44e-12,177;CL:0002087,7.28e-12,115;CL:0002032,1.60e-11,161;CL:0000837,1.60e-11,161;CL:0000860,7.60e-10,42;CL:0002057,7.60e-10,42;CL:0000766,3.20e-09,72;CL:0000557,9.89e-09,67;CL:0000473,1.27e-08,48;CL:0000234,1.27e-08,48;CL:0002009,6.46e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.60e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.34e-07,93 | |||
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| ||
|short_description=p2@NFKB1 | |short_description=p2@NFKB1 | ||
}} | }} |
Latest revision as of 03:57, 20 September 2015
Short description: | p2@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFKB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000226574, ENST00000394820, NM_001165412, NM_003998, uc011cep.1, uc011ceq.1_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | P19838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.10e-18 | 136 |
hematopoietic stem cell | 6.29e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 8.65e-13 | 120 |
hematopoietic cell | 1.44e-12 | 177 |
nongranular leukocyte | 7.28e-12 | 115 |
hematopoietic oligopotent progenitor cell | 1.60e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-11 | 161 |
classical monocyte | 7.60e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.60e-10 | 42 |
myeloid leukocyte | 3.20e-09 | 72 |
granulocyte monocyte progenitor cell | 9.89e-09 | 67 |
defensive cell | 1.27e-08 | 48 |
phagocyte | 1.27e-08 | 48 |
macrophage dendritic cell progenitor | 6.46e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.34e-07 | 93 |