FFCP PHASE1:Hg19::chr10:97453650..97453692,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26123 | |EntrezGene=26123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24519 | |HGNC=24519 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000343162,ENST00000371209,ENST00000478245_5end | |association_with_transcript=0bp_to_ENST00000343162,ENST00000371209,ENST00000478245_5end | ||
|cluster_id=chr10:97453650..97453692,- | |||
|description=CAGE_peak_1_at_TCTN3_5end | |description=CAGE_peak_1_at_TCTN3_5end | ||
|id=chr10:97453650..97453692,- | |id=chr10:97453650..97453692,- | ||
|ontology_enrichment_celltype=CL:0000055!1.91e-19!180;CL:0000220!6.47e-13!246;CL:0002321!9.14e-13!248;CL:0000057!8.49e-12!75;CL:0000548!1.46e-10!679;CL:0000004!1.46e-10!679;CL:0000255!1.46e-10!679;CL:0000012!6.68e-10!682;CL:0000222!3.09e-09!119;CL:0000144!3.84e-08!625;CL:0000499!5.41e-08!27;CL:0002371!7.79e-08!591;CL:0000066!9.64e-08!254;CL:0000183!3.60e-07!59;CL:0000680!9.98e-07!57;CL:0000056!9.98e-07!57;CL:0000355!9.98e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.91e-19!180;CL:0000220!6.47e-13!246;CL:0002321!9.14e-13!248;CL:0000057!8.49e-12!75;CL:0000548!1.46e-10!679;CL:0000004!1.46e-10!679;CL:0000255!1.46e-10!679;CL:0000012!6.68e-10!682;CL:0000222!3.09e-09!119;CL:0000144!3.84e-08!625;CL:0000499!5.41e-08!27;CL:0002371!7.79e-08!591;CL:0000066!9.64e-08!254;CL:0000183!3.60e-07!59;CL:0000680!9.98e-07!57;CL:0000056!9.98e-07!57;CL:0000355!9.98e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000499;5.60e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.84e-13,250;CL:0000057,8.20e-12,76;CL:0000222,1.33e-09,121;CL:0000499,6.04e-08,28;CL:0000066,1.01e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.62e-12!216;UBERON:0005256!7.86e-10!143;UBERON:0003104!6.47e-09!238;UBERON:0009142!6.47e-09!238;UBERON:0000490!3.49e-08!138;UBERON:0002049!4.06e-08!79;UBERON:0007798!4.06e-08!79;UBERON:0003914!4.69e-08!118;UBERON:0000475!6.72e-08!365;UBERON:0004923!1.30e-07!57;UBERON:0009569!1.41e-07!113;UBERON:0000914!1.52e-07!83;UBERON:0002329!1.52e-07!83;UBERON:0003077!1.52e-07!83;UBERON:0003059!1.52e-07!83;UBERON:0007282!1.52e-07!83;UBERON:0009618!1.52e-07!83;UBERON:0007285!1.52e-07!83;UBERON:0000486!4.12e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.64e-11,199;UBERON:0003104,4.17e-11,160;UBERON:0009142,4.17e-11,160;UBERON:0005256,3.17e-09,122;UBERON:0000490,5.84e-09,148;UBERON:0002049,4.38e-08,78;UBERON:0007798,4.38e-08,78;UBERON:0003914,4.68e-08,117;UBERON:0004923,4.96e-08,66;UBERON:0007503,2.33e-07,78;UBERON:0009569,2.57e-07,112;UBERON:0000486,4.23e-07,83 | |||
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92259689231 | ||
|short_description=p1@TCTN3 | |short_description=p1@TCTN3 | ||
}} | }} |
Latest revision as of 04:07, 20 September 2015
Short description: | p1@TCTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCTN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343162, ENST00000371209, ENST00000478245_5end |
EntrezGene: | TCTN3 |
HGNC: | 24519 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.84e-13 | 250 |
fibroblast | 8.20e-12 | 76 |
mesodermal cell | 1.33e-09 | 121 |
stromal cell | 6.04e-08 | 28 |
epithelial cell | 1.01e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.64e-11 | 199 |
mesenchyme | 4.17e-11 | 160 |
entire embryonic mesenchyme | 4.17e-11 | 160 |
trunk mesenchyme | 3.17e-09 | 122 |
unilaminar epithelium | 5.84e-09 | 148 |
vasculature | 4.38e-08 | 78 |
vascular system | 4.38e-08 | 78 |
epithelial tube | 4.68e-08 | 117 |
organ component layer | 4.96e-08 | 66 |
epithelial vesicle | 2.33e-07 | 78 |
subdivision of trunk | 2.57e-07 | 112 |
multilaminar epithelium | 4.23e-07 | 83 |