FFCP PHASE1:Hg19::chr17:39659081..39659098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000464634_5end | |||
|cluster_id=chr17:39659081..39659098,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_9_at_KRT13_5end | |||
|id=chr17:39659081..39659098,- | |||
|ontology_enrichment_celltype=CL:0000039!8.76e-11!7;CL:0000586!8.76e-11!7 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.75e-15;1!CL:0002625;2.75e-15;1!CL:0000216;2.75e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.06e-15,1;CL:0002625,2.06e-15,1;CL:0000216,2.06e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.46e-16;1!UBERON:0008814;2.67e-08;2!UBERON:0010056;2.67e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.77e-21!8;UBERON:0003135!6.22e-21!11;UBERON:0003101!6.13e-13!22;UBERON:0000079!6.13e-13!22;UBERON:0004176!1.14e-12!22;UBERON:0001042!4.64e-12!10;UBERON:0009145!4.64e-12!10;UBERON:0003133!4.89e-12!48;UBERON:0000974!6.59e-12!10;UBERON:0000341!3.50e-11!2;UBERON:0005156!4.60e-11!59;UBERON:0000990!4.60e-11!59;UBERON:0006562!6.13e-11!11;UBERON:0003127!8.53e-11!2;UBERON:0000991!2.38e-10!21;UBERON:0009196!2.38e-10!21;UBERON:0009117!2.38e-10!21;UBERON:0005564!2.38e-10!21;UBERON:0007023!2.11e-08!115;UBERON:0001723!1.49e-07!3;UBERON:0001033!1.49e-07!3;UBERON:0010056!1.49e-07!3;UBERON:0002323!5.70e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.89e-16;8!UBERON:0002372;1.54e-15;1!UBERON:0001961;1.54e-15;1!UBERON:0001744;1.54e-15;1!UBERON:0001042;1.54e-15;1!UBERON:0001735;1.54e-15;1!UBERON:0001136;2.75e-15;1!UBERON:0001343;2.75e-15;1!UBERON:0004910;2.75e-15;1!UBERON:0004813;2.75e-15;1!UBERON:0003135;3.87e-12;11!UBERON:0000002;1.43e-10;6!UBERON:0001560;1.43e-10;6!UBERON:0000341;1.29e-08;2!UBERON:0006562;2.00e-08;2!UBERON:0001255;2.67e-08;2!UBERON:0004909;2.67e-08;2!UBERON:0001556;2.67e-08;2!UBERON:0003133;7.94e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.74e-16,8;UBERON:0002372,1.78e-15,1;UBERON:0001961,1.78e-15,1;UBERON:0001744,1.78e-15,1;UBERON:0001735,1.78e-15,1;UBERON:0001136,2.06e-15,1;UBERON:0001343,2.06e-15,1;UBERON:0004910,2.06e-15,1;UBERON:0005154,2.06e-15,1;UBERON:0005295,2.06e-15,1;UBERON:0004813,2.06e-15,1;UBERON:0005297,2.06e-15,1;UBERON:0005294,2.06e-15,1;UBERON:0010141,2.06e-15,1;UBERON:0005891,2.06e-15,1;UBERON:0003135,3.65e-12,11;UBERON:0000002,1.43e-10,6;UBERON:0001560,1.43e-10,6;UBERON:0000341,1.29e-08,2;UBERON:0004909,2.31e-08,2;UBERON:0001255,3.08e-08,2;UBERON:0001556,3.08e-08,2;UBERON:0003133,2.14e-07,48;UBERON:0007023,3.14e-07,114 | |||
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|short_description=p9@KRT13 | |||
}} | }} |
Latest revision as of 05:26, 20 September 2015
Short description: | p9@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KRT13_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -69bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.06e-15 | 1 |
seminiferous tubule epithelial cell | 2.06e-15 | 1 |
Sertoli cell | 2.06e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.74e-16 | 8 |
tonsil | 1.78e-15 | 1 |
mucosa-associated lymphoid tissue | 1.78e-15 | 1 |
lymphoid tissue | 1.78e-15 | 1 |
tonsillar ring | 1.78e-15 | 1 |
mesothelium | 2.06e-15 | 1 |
seminiferous tubule of testis | 2.06e-15 | 1 |
epithelium of male gonad | 2.06e-15 | 1 |
epithelial cord | 2.06e-15 | 1 |
sex cord | 2.06e-15 | 1 |
seminiferous tubule epithelium | 2.06e-15 | 1 |
testis sex cord | 2.06e-15 | 1 |
genital ridge | 2.06e-15 | 1 |
primitive sex cord of indifferent gonad | 2.06e-15 | 1 |
coelomic epithelium | 2.06e-15 | 1 |
male reproductive organ | 3.65e-12 | 11 |
uterine cervix | 1.43e-10 | 6 |
neck of organ | 1.43e-10 | 6 |
throat | 1.29e-08 | 2 |
epithelium of gonad | 2.31e-08 | 2 |
urinary bladder | 3.08e-08 | 2 |
lower urinary tract | 3.08e-08 | 2 |
reproductive organ | 2.14e-07 | 48 |
adult organism | 3.14e-07 | 114 |