FFCP PHASE1:Hg19::chr14:52313861..52313905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54331 | |EntrezGene=54331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |HGNC=4404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000554832_5end | |association_with_transcript=0bp_to_ENST00000554832_5end | ||
|cluster_id=chr14:52313861..52313905,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_6_at_GNG2_5end | |description=CAGE_peak_6_at_GNG2_5end | ||
|id=chr14:52313861..52313905,+ | |id=chr14:52313861..52313905,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.23e-21!76;CL:0002057!1.94e-21!42;CL:0000860!8.91e-20!45;CL:0000738!1.72e-17!140;CL:0000094!9.24e-15!8;CL:0000767!9.94e-15!3;CL:0000763!1.26e-14!112;CL:0000049!1.26e-14!112;CL:0002032!6.49e-14!165;CL:0000837!6.49e-14!165;CL:0000037!4.23e-13!172;CL:0000566!4.23e-13!172;CL:0000839!5.67e-13!70;CL:0002194!6.88e-13!63;CL:0000576!6.88e-13!63;CL:0000040!6.88e-13!63;CL:0000559!6.88e-13!63;CL:0000557!9.64e-13!71;CL:0002393!1.91e-12!9;CL:0002397!1.91e-12!9;CL:0002009!2.14e-12!65;CL:0000988!4.77e-12!182;CL:0002031!3.40e-11!124;CL:0000081!1.19e-10!11;CL:0002087!1.40e-10!119;CL:0000875!7.60e-07!3;CL:0002396!7.60e-07!3 | |ontology_enrichment_celltype=CL:0000766!1.23e-21!76;CL:0002057!1.94e-21!42;CL:0000860!8.91e-20!45;CL:0000738!1.72e-17!140;CL:0000094!9.24e-15!8;CL:0000767!9.94e-15!3;CL:0000763!1.26e-14!112;CL:0000049!1.26e-14!112;CL:0002032!6.49e-14!165;CL:0000837!6.49e-14!165;CL:0000037!4.23e-13!172;CL:0000566!4.23e-13!172;CL:0000839!5.67e-13!70;CL:0002194!6.88e-13!63;CL:0000576!6.88e-13!63;CL:0000040!6.88e-13!63;CL:0000559!6.88e-13!63;CL:0000557!9.64e-13!71;CL:0002393!1.91e-12!9;CL:0002397!1.91e-12!9;CL:0002009!2.14e-12!65;CL:0000988!4.77e-12!182;CL:0002031!3.40e-11!124;CL:0000081!1.19e-10!11;CL:0002087!1.40e-10!119;CL:0000875!7.60e-07!3;CL:0002396!7.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000771;9.18e-26;2!CL:0000094;1.80e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,9.18e-26,2;CL:0000094,1.80e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.30e-11!80;UBERON:0001474!6.27e-10!86;UBERON:0002390!5.19e-09!102;UBERON:0003061!5.19e-09!102;UBERON:0004765!5.86e-08!101;UBERON:0001434!5.86e-08!101;UBERON:0002193!6.89e-08!112;UBERON:0002405!1.37e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!6.30e-11!80;UBERON:0001474!6.27e-10!86;UBERON:0002390!5.19e-09!102;UBERON:0003061!5.19e-09!102;UBERON:0004765!5.86e-08!101;UBERON:0001434!5.86e-08!101;UBERON:0002193!6.89e-08!112;UBERON:0002405!1.37e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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| ||
|short_description=p6@GNG2 | |short_description=p6@GNG2 | ||
}} | }} |
Latest revision as of 05:28, 20 September 2015
Short description: | p6@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GNG2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000554832_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 9.18e-26 | 2 |
granulocyte | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |