FFCP PHASE1:Hg19::chr18:657610..657633,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:657610..657633,+ to FFCP PHASE1:Hg19::chr18:657610..657633,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7298 | |EntrezGene=7298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12441 | |HGNC=12441 | ||
|TSSclassifier=strong | |||
|UniProt=P04818,Q53Y97,Q8WYK3,Q8WYK4 | |UniProt=P04818,Q53Y97,Q8WYK3,Q8WYK4 | ||
|association_with_transcript=6bp_to_ENST00000323274,NM_001071,uc010dka.1,uc010dkb.1,uc010dkc.1_5end | |||
|cluster_id=chr18:657610..657633,+ | |||
|coexpression_cluster_id=C3737 | |||
|description=CAGE_peak_2_at_TYMS_5end | |||
|id=chr18:657610..657633,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.18e-16!254;CL:0000012!1.84e-15!682;CL:0000548!4.60e-15!679;CL:0000004!4.60e-15!679;CL:0000255!4.60e-15!679;CL:0002321!7.57e-11!248;CL:0000220!1.61e-10!246;CL:0000003!3.07e-08!722;CL:0000055!1.04e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.54e-16,253;CL:0002321,1.95e-09,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.52e-33!235;DOID:14566!8.94e-32!239;DOID:2531!1.14e-19!51;DOID:0060083!1.14e-19!51;DOID:1240!4.36e-17!39;DOID:0050686!5.08e-17!137;DOID:0050687!2.69e-15!143;DOID:8692!2.10e-13!31;DOID:305!9.08e-12!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.02e-14;39!DOID:8692;1.27e-13;31!DOID:2531;1.20e-12;51!DOID:0060083;1.20e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.10e-32,235;DOID:14566,1.21e-30,239;DOID:2531,3.75e-20,51;DOID:0060083,3.75e-20,51;DOID:1240,9.92e-18,39;DOID:0050686,3.86e-16,137;DOID:0050687,1.81e-14,143;DOID:8692,6.80e-14,31;DOID:305,3.67e-11,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,1.92690471501885,0.281908808191942,0,0,0,7.59899634504932,0.631719873426831,1.56711376919903,8.3549538410513,4.18680700783456,5.24259293112413,3.16520373874144,0.990130823680373,1.32558950291166,1.34465029290355,3.01347264011988,5.11217063271161,1.95173119516203,6.89477925230012,7.14002419354885,5.01527554364941,6.5834277040143,15.7405588833817,11.2988375635323,20.402379334703,22.659762688185,20.2286707976156,0,0,0.309632246632152,0,2.10844143144775,0.739508020333575,5.11283523829991,9.2410001116824,12.3312184520636,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,2.64342657158052,0.560508562981536,14.4861246626292,0,0.393010762749165,0,0.501559486172034,0,0,0,1.22551502573691,0,0.443067789167242,0,4.48319619039863,4.55207716459574,6.08420247033602,4.42160028457357,2.60822777161547,0,0,0,4.87230173599535,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,4.02420515822182,3.83587685530591,3.61439152384566,1.00267582127178,1.44846518960824,1.5905718941022,2.43317435151318,5.48301939551594,5.76496433402666,7.29028721252946,2.03017567021455,3.64295288292542,11.4943177263173,0,0,0,0,0.571994910780128,0,5.56534740626774,6.881876760849,3.47140501607594,5.08777147731609,7.97048928798821,9.62913146790236,11.076733226451,3.6178346283706,1.77883131343355,3.3472061276467,3.62546385398232,2.28081631715554,4.14905497831888,3.67663080345869,2.43042584364528,9.2871717415443,8.75664553242062,9.00891843866578,4.5994991239765,1.89853131913626,6.22885929363385,0,0,4.79703457356788,0.993943903390637,5.31848148991235,0.397227542439656,2.58152958673932,9.22137793715728,3.36406560085384,1.06748995729705,1.97334038733728,3.42332138939743,2.15537075311501,6.53847612453835,1.05950199351452,1.72852777344,8.66989297785048,2.18512053781224,6.27519003698894,2.54062756938062,13.0352293494579,10.3598684395604,11.5169661495844,2.24569588380383,15.4771239812828,1.75653827998801,2.37600571456411,3.21447008062124,0.910161361938026,1.43723628363248,11.6151918628306,18.5175409410507,6.37247465613621,3.5118209670467,3.0648779579902,2.70428506031874,10.0954643012419,4.48474089222155,1.49490172172997,2.33125091275518,2.40072876867522,1.95799805553034,0.515281080091258,1.30281799432113,4.38818463827292,1.94874010322397,4.03894038790583,0.736399189138395,1.2931684545505,1.06502877754984,2.92181084860157,7.63022665397194,2.12586938479627,3.27295344709002,1.72082757233402,6.70855383712775,6.49395864775278,8.36596388660532,9.95146128147556,8.83122978064699,6.93456982244077,1.56449532329816,1.92972281457866,15.1948413487729,0.928735856063958,0,12.1856004041039,13.4867752062481,13.014595613708,15.110274264338,11.9833694250823,12.8126134319992,14.6966125894579,12.3619523028968,13.8508976500701,5.16708818237254,5.60967095213783,3.2925920906512,2.94017422771084,0,0,0,37.0829003508306,3.68965315629341,4.63233087806019,0.329250856225877,3.37205259772859,8.44443368257699,4.44424536760942,2.93227474779292,8.31947828223663,8.6598805215164,6.37617227362923,1.52631302506568,3.3204282985047,9.25971025153221,3.04406643575357,7.11183958163348,2.57545848628462,0,0.702012795417713,6.68840230299277,8.43604505880993,0.671928512795438,1.84307626415102,4.56748465784526,5.81267877027924,16.4854552041041,1.47798971368783,2.72950145441001,0.207328115540772,0,0,7.11176416072293,3.05590740446622,0,8.55362230113526,10.5912317484423,6.60754727256618,6.85983438313388,6.16720963899484,7.41132117016576,8.87393258433495,0.904902010304444,0,6.762422020448,0.26593811658487,1.04007436911366,13.1175760873692,18.4403871630262,8.79193190753128,1.85871391755592,0,13.9950857252731,5.5375151329935,0.355391948742546,20.5907486962692,0.602878754119172,0.871533458600294,0.99972991182057,0,0,0,0.479249710983165,0,5.70547620162874,1.73737568001095,1.84928690295345,5.37182889719687,5.38008691168931,0.197030760201927,0,0,3.04913549066956,5.20559415430487,3.86644406388848,2.17771144934653,4.46557126157214,0,0,0,0.12269149171914,0.500170521059677,1.08506009479894,1.03985430765404,1.78428988797162,1.26161932027148,1.7571212248907,0.601892199455438,2.27407504055985,3.10419213877515,2.65690239414175,9.58719676416856,7.99329253106362,0.783204629850962,0,0,0,0.106727557803444,5.15316871458641,1.66435439510497,13.6075631998356,0.248107807818777,0.767309866440312,1.12264037773229,0.384417447767103,0.511707249066704,0.321707842287215,2.96836132889982,9.86942040336996,4.6166048581413,6.07740954502188,5.19254429183621,6.04293967991788,3.38406458856542,1.00253235151642,0.276242966807689,5.74072240823034,8.19410256030227,1.70461739447251,5.86559496779635,6.85436500229291,8.62784746094541,8.76835347919564,4.64427167128653,10.2360045663807,3.40187410553031,8.63663664408557,7.71136263451447,7.04460737614017,5.01689773854853,9.68529837571146,5.81753206250107,9.62661445305367,8.98965494248332,15.9475625125189,10.514455129772,4.264190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| ||
|short_description=p2@TYMS | |||
}} | }} |
Latest revision as of 05:54, 20 September 2015
Short description: | p2@TYMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TYMS_5end |
Coexpression cluster: | C3737_chronic_Hodgkin_acute_merkel_Hep2_hereditary_cord |
Association with transcript: | 6bp_to_ENST00000323274, NM_001071, uc010dka.1, uc010dkb.1, uc010dkc.1_5end |
EntrezGene: | TYMS |
HGNC: | 12441 |
UniProt: | P04818Q53Y97Q8WYK3Q8WYK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.54e-16 | 253 |
embryonic cell | 1.95e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.10e-32 | 235 |
disease of cellular proliferation | 1.21e-30 | 239 |
hematologic cancer | 3.75e-20 | 51 |
immune system cancer | 3.75e-20 | 51 |
leukemia | 9.92e-18 | 39 |
organ system cancer | 3.86e-16 | 137 |
cell type cancer | 1.81e-14 | 143 |
myeloid leukemia | 6.80e-14 | 31 |
carcinoma | 3.67e-11 | 106 |