FFCP PHASE1:Hg19::chr18:6729666..6729693,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:6729666..6729693,+
|short_description=p2@ARHGAP28
|description=CAGE_peak_2_at_ARHGAP28_5end
|association_with_transcript=-127bp_to_ENST00000400091_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79822 | |EntrezGene=79822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25509 | |HGNC=25509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-127bp_to_ENST00000400091_5end | |||
|cluster_id=chr18:6729666..6729693,+ | |||
|coexpression_cluster_id=C3738 | |||
|description=CAGE_peak_2_at_ARHGAP28_5end | |||
|id=chr18:6729666..6729693,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.60e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.87e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.14e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.45e-11!347;UBERON:0000468!2.83e-07!659;UBERON:0000922!4.30e-07!612;UBERON:0000475!7.81e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.94e-09;16!UBERON:0002036;1.94e-09;16!UBERON:0004905;6.51e-08;8!UBERON:0000982;6.51e-08;8!UBERON:0004770;6.51e-08;8!UBERON:0011135;4.69e-07;5!UBERON:0002216;4.69e-07;5!UBERON:0011134;4.69e-07;5!UBERON:0002209;4.69e-07;5!UBERON:0002213;4.69e-07;5!UBERON:0007844;4.69e-07;5!UBERON:0011138;4.69e-07;5!UBERON:0001130;4.69e-07;5!UBERON:0001066;4.69e-07;5!UBERON:0001468;4.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,6.63e-08,8;UBERON:0000982,6.63e-08,8;UBERON:0004770,6.63e-08,8;UBERON:0011135,4.69e-07,5;UBERON:0002216,4.69e-07,5;UBERON:0011134,4.69e-07,5;UBERON:0002209,4.69e-07,5;UBERON:0002213,4.69e-07,5;UBERON:0005856,4.69e-07,5;UBERON:0005866,4.69e-07,5;UBERON:0005863,4.69e-07,5;UBERON:0007844,4.69e-07,5;UBERON:0011138,4.69e-07,5;UBERON:0001130,4.69e-07,5;UBERON:0001066,4.69e-07,5;UBERON:0001468,4.69e-07,5 | |||
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| ||
|short_description=p2@ARHGAP28 | |||
}} | }} |
Latest revision as of 06:33, 20 September 2015
Short description: | p2@ARHGAP28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGAP28_5end |
Coexpression cluster: | C3738_medulloblastoma_leiomyoblastoma_normal_tridermal_colon_synovial_rhabdomyosarcoma |
Association with transcript: | -127bp_to_ENST00000400091_5end |
EntrezGene: | ARHGAP28 |
HGNC: | 25509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
articulation | 6.63e-08 | 8 |
skeletal joint | 6.63e-08 | 8 |
articular system | 6.63e-08 | 8 |
intervertebral cartilage | 4.69e-07 | 5 |
symphysis | 4.69e-07 | 5 |
nonsynovial joint | 4.69e-07 | 5 |
fibrous joint | 4.69e-07 | 5 |
cartilaginous joint | 4.69e-07 | 5 |
developing mesenchymal condensation | 4.69e-07 | 5 |
pre-cartilage condensation | 4.69e-07 | 5 |
cartilaginous condensation | 4.69e-07 | 5 |
cartilage element | 4.69e-07 | 5 |
post-cranial axial skeletal system | 4.69e-07 | 5 |
vertebral column | 4.69e-07 | 5 |
intervertebral disk | 4.69e-07 | 5 |
intervertebral joint | 4.69e-07 | 5 |