FFCP PHASE1:Hg19::chr16:11681228..11681235,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:11681228..11681235,- to FFCP PHASE1:Hg19::chr16:11681228..11681235,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_NR_024320,uc002dbd.2_5end | |||
|cluster_id=chr16:11681228..11681235,- | |||
|description=CAGE_peak_11_at_LITAF_5end | |||
|id=chr16:11681228..11681235,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;3.83e-16;2!CL:1000448;3.83e-16;2!CL:0002308;3.83e-16;2!CL:0002140;3.83e-16;2!CL:0002159;1.00e-08;14!CL:0002032;1.05e-08;1!CL:0000557;1.05e-08;1!CL:0002077;1.26e-08;34!CL:0000148;2.72e-07;10!CL:0000622;5.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,3.44e-16,2;CL:1000448,3.44e-16,2;CL:0002308,3.44e-16,2;CL:0002140,3.44e-16,2;CL:0002077,3.48e-10,34;CL:0002159,7.16e-09,14;CL:0000148,1.86e-07,10;CL:0000541,1.86e-07,10;CL:0000622,5.40e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.05e-08;1!DOID:3149;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.02e-09,1;DOID:3149,9.02e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.83e-16;2!UBERON:0007771;3.83e-16;2!UBERON:0003297;3.83e-16;2!UBERON:0001821;3.83e-16;2!UBERON:0003487;3.83e-16;2!UBERON:0001820;3.83e-16;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,3.44e-16,2;UBERON:0007771,3.44e-16,2;UBERON:0003297,3.44e-16,2;UBERON:0001821,3.44e-16,2;UBERON:0003487,3.44e-16,2;UBERON:0001820,3.44e-16,2;UBERON:0005089,3.44e-16,2;UBERON:0005088,3.44e-16,2 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0,0.572471974262113,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0.77272670290256,0.872389432677388,0,0,0.929716147622738,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,1.27867425159808,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,1.00499466102697,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.296573126324121,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.710331756132051,0.821127996921047,0.201606743224732,0,0.289648807765598,0,0,0.383587685530591,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0.728590576585084,1.48313777113772,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0.67824236924195,0.773043412653187,1.36373060295417,0.860413786167011,0.121973706129595,0.265059536642971,0.348581828608555,0.414644220061482,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0.703702806881416,0.370353780634118,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.297262324577456,1.87467667973554,0.16798212819886,0.567100388969546,0.179117045405697,0,0,0,0.176096868026452,0.414656231081544,0.288239906833923,0.12624243342638,0.698476837213859,0.381988425558278,0,1.71072446022705,2.36503233217644,1.50171528921959,0,0.112131084345361,0.43596006883328,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0,0,0.385029108839245,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,2.07207756718018,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0.320182673410333,0.303127571446259,0,0,0,0.153461973288062,0.280660094433074,0,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.309123034943167,0.183138929636687,0,2.29706215198469,1.30012049207304,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0.384888450902048,0.670302275535787,2.17781969722645,0.188287601553558,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0.476463550915578,0,1.29694662238543,0.540031437238115,1.58625035258854,0.106824071127473,0,0.735120647943095,0,0.144269212976445,0,0.159426272728822,0.399158742865633,0.5745161103971,0.211673582723883,0,0,0.456469358066384,0,0,0.50787533340481,0.321176150207399,0,0,0.343505344755765,0,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0.36408156524854,0,0,0,0,0,0,0.140669416410513,1.11308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0.7812832832557,0,0.724999575434793,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0.21787692703798,1.11538995422883,0.307801034015188,0,0,0.269272933229316,0,0,0.183195186803725,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0.424059214301822,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0.370691816839509,0.313265848516366,0.269604531922708,0,0.468528891450678,0.182454789215666,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0.103688191397247,0,0.661983911750998,0,0,0.569219092059585,0,0.347119476670262,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| 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| ||
|short_description=p11@LITAF | |||
}} | }} |
Latest revision as of 06:38, 20 September 2015
Short description: | p11@LITAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LITAF_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_NR_024320, uc002dbd.2_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 3.44e-16 | 2 |
epithelial cell of sweat gland | 3.44e-16 | 2 |
epithelial cell of skin gland | 3.44e-16 | 2 |
acinar cell of sebaceous gland | 3.44e-16 | 2 |
ecto-epithelial cell | 3.48e-10 | 34 |
general ecto-epithelial cell | 7.16e-09 | 14 |
melanocyte | 1.86e-07 | 10 |
melanoblast | 1.86e-07 | 10 |
acinar cell | 5.40e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin gland | 3.44e-16 | 2 |
epidermis gland | 3.44e-16 | 2 |
gland of integumental system | 3.44e-16 | 2 |
sebaceous gland | 3.44e-16 | 2 |
skin sebaceous gland | 3.44e-16 | 2 |
sweat gland | 3.44e-16 | 2 |
sweat gland placode | 3.44e-16 | 2 |
sebaceous gland placode | 3.44e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.02e-09 | 1 |
keratoacanthoma | 9.02e-09 | 1 |