FFCP PHASE1:Hg19::chr20:18125925..18125964,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:18125925..18125964,+
|short_description=p5@CSRP2BP
|description=CAGE_peak_5_at_CSRP2BP_5end
|association_with_transcript=182bp_to_ENST00000489634,NR_02840...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57325 | |EntrezGene=57325 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15904 | |HGNC=15904 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=182bp_to_ENST00000489634,NR_028402,uc002wqk.2_5end | |||
|cluster_id=chr20:18125925..18125964,+ | |||
|coexpression_cluster_id=C1004 | |||
|description=CAGE_peak_5_at_CSRP2BP_5end | |||
|id=chr20:18125925..18125964,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.17e-18!7;CL:0000586!3.17e-18!7;CL:0002541!3.99e-12!3;CL:0000083!2.27e-08!4;CL:0000710!2.61e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.04e-60;3!CL:0002563;9.46e-21;4!CL:0000349;4.64e-17;19!CL:0000039;1.89e-12;7!CL:0000586;1.89e-12;7!CL:0002253;3.35e-11;2!CL:0002231;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.68e-60,3;CL:0002563,1.05e-20,4;CL:0000349,4.64e-17,19;CL:0000039,1.89e-12,7;CL:0000586,1.89e-12,7;CL:0002253,3.70e-11,2;CL:0002231,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!5.64e-09!22;DOID:2994!5.64e-09!22;DOID:1793!2.27e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:1799;5.16e-21;1!DOID:10165;5.16e-21;1!DOID:1798;5.16e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.22e-21,1;DOID:10165,4.22e-21,1;DOID:1798,4.22e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.99e-12!3;UBERON:0000920!3.99e-12!3;UBERON:0005631!4.29e-12!14;UBERON:0000158!4.29e-12!14;UBERON:0003124!8.05e-09!7;UBERON:0000473!6.52e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.04e-60;3!UBERON:0000920;6.04e-60;3!UBERON:0005631;5.94e-32;10!UBERON:0000158;5.94e-32;10!UBERON:0001242;9.46e-21;4!UBERON:0001262;9.46e-21;4!UBERON:0004786;9.46e-21;4!UBERON:0004808;9.46e-21;4!UBERON:0001277;9.46e-21;4!UBERON:0000478;1.35e-13;24!UBERON:0000485;2.66e-12;7!UBERON:0003929;2.66e-12;7!UBERON:0003350;6.94e-11;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.68e-60,3;UBERON:0003124,3.45e-26,7;UBERON:0005631,5.57e-23,14;UBERON:0000158,5.57e-23,14;UBERON:0001242,1.05e-20,4;UBERON:0001262,1.05e-20,4;UBERON:0004786,1.05e-20,4;UBERON:0004808,1.05e-20,4;UBERON:0001277,1.05e-20,4;UBERON:0000478,1.35e-13,24;UBERON:0003350,7.30e-11,8;UBERON:0004923,9.79e-11,66;UBERON:0000485,9.24e-10,9 | |||
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| ||
|short_description=p5@CSRP2BP | |||
}} | }} |
Latest revision as of 07:10, 20 September 2015
Short description: | p5@CSRP2BP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CSRP2BP_5end |
Coexpression cluster: | C1004_chorionic_pancreatic_choriocarcinoma_amniotic_placenta_colon_Placental |
Association with transcript: | 182bp_to_ENST00000489634, NR_028402, uc002wqk.2_5end |
EntrezGene: | CSRP2BP |
HGNC: | 15904 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.68e-60 | 3 |
intestinal epithelial cell | 1.05e-20 | 4 |
extraembryonic cell | 4.64e-17 | 19 |
germ line cell | 1.89e-12 | 7 |
germ cell | 1.89e-12 | 7 |
epithelial cell of large intestine | 3.70e-11 | 2 |
epithelial cell of prostate | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.68e-60 | 3 |
chorion | 3.45e-26 | 7 |
extraembryonic membrane | 5.57e-23 | 14 |
membranous layer | 5.57e-23 | 14 |
intestinal mucosa | 1.05e-20 | 4 |
wall of intestine | 1.05e-20 | 4 |
gastrointestinal system mucosa | 1.05e-20 | 4 |
gastrointestinal system epithelium | 1.05e-20 | 4 |
intestinal epithelium | 1.05e-20 | 4 |
extraembryonic structure | 1.35e-13 | 24 |
epithelium of mucosa | 7.30e-11 | 8 |
organ component layer | 9.79e-11 | 66 |
simple columnar epithelium | 9.24e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.22e-21 | 1 |
endocrine pancreas cancer | 4.22e-21 | 1 |
pancreatic endocrine carcinoma | 4.22e-21 | 1 |