FFCP PHASE1:Hg19::chr9:116327852..116327867,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9999 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-107bp_to_uc011lxh.1_5end | |||
|cluster_id=chr9:116327852..116327867,+ | |||
|description=CAGE_peak_9_at_RGS3_5end | |||
|id=chr9:116327852..116327867,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-07!254;CL:0002076!2.55e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.41e-11;42!CL:0002368;2.69e-10;13!CL:0002251;1.49e-07;20!CL:0002159;7.20e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.61e-13,42;CL:0000066,4.52e-13,253;CL:0002368,3.62e-10,13;CL:0000223,3.31e-09,58;CL:0002251,2.02e-07,20;CL:0002159,6.99e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-07!115;UBERON:0003103!4.21e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.76e-07,160;UBERON:0000925,2.76e-07,160;UBERON:0006595,2.76e-07,160 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,1.04474251279935,1.22866968250754,4.18680700783456,1.52908960491121,0.791300934685361,0.990130823680373,0.994192127183747,0,0,0,0,0,1.22400414746552,1.25381888591235,0,0.410623275218653,0,0.916960868975415,0.246301768349837,0.550975469195755,0,0,0.464448369948228,0,2.10844143144775,4.80680213216824,0,0,0,0,0,0.217010870715852,0,0,0,0.581592955118259,0,0.727752183563449,0,0,0,0,0,0.47296445977717,0,0,1.35426486594342,0,0,0,0,0,0,0,0,2.13112375266347,0.580418477257168,0.56738522469114,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,1.34140171940727,1.79007586580942,0.361439152384566,1.50401373190767,0.144846518960824,1.5905718941022,1.45990461090791,1.79616152611729,1.55210578223795,2.10803485663503,0.327447688744282,5.46442932438813,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,15.511210565933,2.18047026071267,0,0.506522046658319,0,0.286836620748814,0.709336764396714,0.560677600142307,0,1.72667283892012,0.933633106199299,0.134710672069688,0,0.302714855289863,0,0.70296429550139,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.453728732640084,0,0.427114777637135,0.211931901159562,0,0,0,0,0.337552664482532,0.292311015483596,0,0.0920498986422993,0,0,0,0.508681776931463,3.67195621010264,1.09098448236334,2.29443676311203,0.243947412259191,0,0.116193942869518,1.14027160516907,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,2.85350742062426,6.74410519545717,0.402115889646523,1.11106134190236,0,0,0,0.463721619900307,1.05667824812239,0,0,0,0,0,0,0,0,2.81201501960331,1.00789276919316,1.70130116690864,3.22410681730254,1.74380363108377,4.21720947081732,0,0,0.414656231081544,0,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0.257207374262142,0,0.799266537048298,0,0,0,0,0,0,1.80863626235752,0.871533458600294,6.09835246210548,0,0,0,0.479249710983165,2.29723871668228,5.70547620162874,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,14.9801404789436,8.97484377612075,16.1622050240054,0.858840442033979,1.50051156317903,0.813795071099207,0.415941723061614,0.535286966391485,0.157702415033935,0.117141414992713,0,2.27407504055985,3.10419213877515,0,0.553107505625109,0,2.74121620447837,1.71571711905428,0,0.647142602455851,0,0.909382714338778,0,1.5119514666484,0,0.306923946576125,0.280660094433074,0,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0,0,8.22076528243468,3.49907757956406,0,0.364182336013434,0.131124414959424,4.96319574198153,0.924184045252977,0.784349769176855,1.46139224653261,0.949964660035881,0,0,0,0,2.98041081298238,5.01689773854853,1.01950509218015,2.49322802678617,0.671624264166535,0,0,0.512900250232778,1.96808787419823,1.95227036798582,0.824328093181778,0.27470839445503,0,3.44559322797703,4.55042172225565,0,0.773365746336976,0,0.460511024178389,0,0.107420244868274,0.145016693914229,0.255679882248303,1.33548053470106,9.75181000629771,8.26417289669956,4.72167036229961,8.29493803015509,0,0,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,1.48863347743867,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,2.50177493086331,2.01090682660736,4.3556393944529,0.847294206991012,1.29151611801369,3.36942951335251,3.10401107475673,2.52695740227655,2.53723804616085,5.35246044999663,9.1143549947866,4.52640373369799,4.11362273086194,5.83625980073446,3.24018862342869,6.34500141035416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.890894042497916,1.84296421259539,0,0.140669416410513,0.667852230137435,0,0,0.996239941255349,0.276283915531148,0,0.511343412510774,12.431565351568,0.311039587661807,1.61763032065188,7.33986816169998,0,0.986434056369336,2.3948309234694,0,0,0.0927680981618513,1.99613798001194,0,16.3550199992886,0.724999575434793,2.38966241399549,3.81380475439149,0,0.689486746482929,0,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0.886642856860642,0.438770794307945,0,11.5721707751241,0.461701551022782,0,0,0.807818799687949,0.651884231532048,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,1.41542379259422,0,7.02793337176017,0,4.30462161650597,0,3.15667522279512,0,0.61214552326098,0.947798694427319,0,0,0,0,0,0,0,0,0,5.78155144744828,0,1.22308667769421,0.171986032471617,0,0,0,0.872901148395775,0,1.35588444468319,0.137041924646751,0.19871461170299,0,0.391102765469606,0,2.98834192635094,4.59562102038899,12.9681375438695,0,0.171594997861965,0.14405479798815,0.248505071130865,7.07082103850386,0.951329442515298,0.941425616810999,0.611989305817931,0.288950589901519,0,0,0,1.28929632425987,0,0.279282401272254,3.43740636017525,0,1.79711100449092,3.43380838509257,5.35611497860494,6.9198976661328,0,4.65983798109815,0.236349546921671,0.0824158583811665,0.0674035438541849,0.688992370603241,0,0,0.136203406111576,0.321506296930038,0,0,0,1.5476039091159,0.242998226632099,0,0.551639951094387,0.314727528809989,0.211200673038813,0,3.83830394638891,0,1.32418394073086,1.017074150619,0,0.864221491201268,0,0,0,0.170388021785422,0.679872549120754,0.146552233678082,0,0.646414781807753,0.39669780522807,0,0,1.17466153824464,1.25763444079733,0.828478110694391,0.992332043623902,2.56895121467328,0.60896299190448,21.065261506416,0,0,0,0,1.25643277000187,0,0,0,0,0.776503360757966,1.30402446176905,0,1.49976489554528,0.454947352624943,0,3.52898729547258,0,2.17381542916238,0,0,0,0.568209015825267,0.754703705257725,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0,0.150257608997218,1.14241563650639,0,0,0.537052785212442,0,0.398095888698616,0.400027764663154,0,0,0,0.385239660814607,7.07657251537255,19.3135776054257,0.906823702049089,0,0,0,0.926404341482917,2.63140859494449,0,2.70079653579281,0.506827321959218,0.256241518587947,0,0,0,0,0,0,1.96565909307848,0,8.66379705770371,0,0.320075189082423,8.09410404405834,0,0,5.73505981649722,4.97661808026378,0.127894371303652,3.45039396469382,4.08891448825331,0,0,0,0.247871528518004,0,0,0,0,1.05802783107205,2.1437183414724,0.192687675289379,0,0,0,0.252071696221718,0.414943514785307,0,1.42769420259154,4.2203518955441,0,2.93485757634686,1.5018336599544,1.52552838186867,0,0.397832444232549,0.752103283492572,0,2.34454203369928,0,0.818859587550484,6.65352387976704,0.337687923091973,0,0,0,1.09394961803644,2.74128883428591,0,0.175871244359621,4.85497225030462,1.07140367175657,0.672567444437648,0,0.227662191351298,0.0887023701626388,0.230467975111559,0.171488009437418,0.815636795721981,0.131545547125698,0,0,0.706437835654626,0.628462359664008,3.08299379645168,0.913158720509496,0,0,1.07214816264985,0,0.116241425368125,0.869291361512897,0,0.828864656652147,0.6828739083758,0,1.72090943528111,0,0,6.35080575286394,0.9164274741762,0.31020638566432,0,0.447421727191169,12.8576806035968,3.53561982448581,0,1.23195368227496,0,1.94284397223656,0,0.198950775161368,0,0.45178432815584,0,13.888581608134,0.540219106755613,0.218559560503957,7.52507674178437,0,0.235676547101626,0,0.594092800654172,1.2679671827502,0.509781344063451,0.0939839179798536,0.45120521581504,0,0.535661815816973,2.82315897372553,4.17255106783675,0,0.458729283404541,0,0.473314686579554,0.0679914901909147,1.30905207102113,1.0580536810308,0,0.462175628631418,0,0.126166424835079,0.218531143927391,0,0.509944148709909,1.60330443159336,0,0.250707539292375,0.530450887527676,0.267964130156178,6.63335551567024,1.13776295448085,1.49263787330687,1.1903221573187,0.258355639344024,0.496597714366863,0.224263725161227,2.5458863311266,3.43599221228973,1.74173398317569,0.684466602170562,1.27968900727716,1.43444410785353,1.33064142618405,6.02384187721211,0.426909383510862,0,0.628776414746108,4.69281884806909,0.122241444182866,0.406896178315738,1.33151354837103,0.201273793591026,0.961705476909699 | |||
|short_description=p9@RGS3 | |||
}} |
Latest revision as of 07:23, 20 September 2015
Short description: | p9@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_uc011lxh.1_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.61e-13 | 42 |
epithelial cell | 4.52e-13 | 253 |
respiratory epithelial cell | 3.62e-10 | 13 |
endodermal cell | 3.31e-09 | 58 |
epithelial cell of alimentary canal | 2.02e-07 | 20 |
general ecto-epithelial cell | 6.99e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.76e-07 | 160 |
endoderm | 2.76e-07 | 160 |
presumptive endoderm | 2.76e-07 | 160 |