FFCP PHASE1:Hg19::chrX:19002194..19002206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5256 | |EntrezGene=5256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=8926 | |HGNC=8926 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P46019 | |UniProt=P46019 | ||
|association_with_transcript=273bp_to_NM_000292,uc004cyv.3_5end | |association_with_transcript=273bp_to_NM_000292,uc004cyv.3_5end | ||
|cluster_id=chrX:19002194..19002206,- | |||
|coexpression_cluster_id=C4867 | |coexpression_cluster_id=C4867 | ||
|description=CAGE_peak_13_at_PHKA2_5end | |description=CAGE_peak_13_at_PHKA2_5end | ||
Latest revision as of 07:27, 20 September 2015
| Short description: | p13@PHKA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_13_at_PHKA2_5end |
| Coexpression cluster: | C4867_Hepatocyte_liver_Eosinophils_colon_mature_Neutrophils_renal |
| Association with transcript: | 273bp_to_NM_000292, uc004cyv.3_5end |
| EntrezGene: | PHKA2 |
| HGNC: | 8926 |
| UniProt: | P46019 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p13@PHKA2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 3.37e-14 | 12 |
| eosinophil | 9.41e-11 | 2 |
| granulocyte | 3.62e-10 | 8 |
| neutrophil | 9.41e-08 | 3 |
| blood cell | 2.09e-07 | 11 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| liver | 1.51e-15 | 19 |
| digestive gland | 1.51e-15 | 19 |
| liver bud | 1.51e-15 | 19 |
| hepatic diverticulum | 2.99e-13 | 22 |
| liver primordium | 2.99e-13 | 22 |
| digestive tract diverticulum | 1.28e-12 | 23 |
| epithelial sac | 1.66e-11 | 25 |
| epithelium of foregut-midgut junction | 1.66e-11 | 25 |
| anatomical boundary | 1.66e-11 | 25 |
| hepatobiliary system | 1.66e-11 | 25 |
Showing 1 to 10 of 19 entries
