FFCP PHASE2:Hg19::chr7:100271411..100271434,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2783 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4398 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4398 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B3KPU1 | ||
|association_with_transcript=-11bp_to_ENST00000419828_5end | |association_with_transcript=-11bp_to_ENST00000419828_5end | ||
|cluster_id=chr7:100271411..100271434,+ | |cluster_id=chr7:100271411..100271434,+ | ||
Latest revision as of 08:30, 20 September 2015
| Short description: | p1@GNB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GNB2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -11bp_to_ENST00000419828_5end |
| EntrezGene: | GNB2 |
| HGNC: | 4398 |
| UniProt: | B3KPU1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GNB2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 2.18e-18 | 121 |
| defensive cell | 5.91e-17 | 48 |
| phagocyte | 5.91e-17 | 48 |
| classical monocyte | 1.00e-16 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.00e-16 | 42 |
| monopoietic cell | 9.52e-14 | 59 |
| monocyte | 9.52e-14 | 59 |
| monoblast | 9.52e-14 | 59 |
| promonocyte | 9.52e-14 | 59 |
| macrophage dendritic cell progenitor | 1.60e-13 | 61 |
Showing 1 to 10 of 32 entries
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 8.03e-28 | 203 |
| mesoderm | 9.53e-23 | 315 |
| mesoderm-derived structure | 9.53e-23 | 315 |
| presumptive mesoderm | 9.53e-23 | 315 |
| musculoskeletal system | 1.52e-20 | 167 |
| cardiovascular system | 1.80e-17 | 109 |
| splanchnic layer of lateral plate mesoderm | 2.58e-17 | 83 |
| circulatory system | 9.55e-17 | 112 |
| epithelial tube open at both ends | 2.75e-16 | 59 |
| blood vessel | 2.75e-16 | 59 |
Showing 1 to 10 of 64 entries
