FFCP PHASE2:Hg19::chr7:100273771..100273802,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2783 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4398 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4398 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P62879 | ||
|association_with_transcript=10bp_to_ENST00000393924,uc003uwe.2_5end | |association_with_transcript=10bp_to_ENST00000393924,uc003uwe.2_5end | ||
|cluster_id=chr7:100273771..100273802,+ | |cluster_id=chr7:100273771..100273802,+ | ||
Latest revision as of 08:46, 20 September 2015
| Short description: | p7@GNB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_GNB2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 10bp_to_ENST00000393924, uc003uwe.2_5end |
| EntrezGene: | GNB2 |
| HGNC: | 4398 |
| UniProt: | P62879 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@GNB2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 7.60e-20 | 42 |
| CD14-positive, CD16-negative classical monocyte | 7.60e-20 | 42 |
| defensive cell | 7.84e-16 | 48 |
| phagocyte | 7.84e-16 | 48 |
| epithelial cell of nephron | 2.50e-14 | 15 |
| myeloid leukocyte | 5.74e-13 | 72 |
| kidney cell | 5.30e-12 | 17 |
| kidney epithelial cell | 5.30e-12 | 17 |
| mesodermal cell | 5.64e-12 | 121 |
| endothelial cell | 2.24e-11 | 36 |
Showing 1 to 10 of 38 entries
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 1.11e-16 | 203 |
| nephron epithelium | 2.50e-14 | 15 |
| renal tubule | 2.50e-14 | 15 |
| nephron tubule | 2.50e-14 | 15 |
| nephron | 2.50e-14 | 15 |
| uriniferous tubule | 2.50e-14 | 15 |
| nephrogenic mesenchyme | 2.50e-14 | 15 |
| excretory tube | 4.34e-13 | 16 |
| kidney epithelium | 4.34e-13 | 16 |
| vasculature | 9.77e-13 | 78 |
Showing 1 to 10 of 61 entries
