FFCP PHASE1:Hg19::chr2:218990394..218990409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3579 | |EntrezGene=3579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6027 | |HGNC=6027 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2F9 | |UniProt=C9J2F9 | ||
|association_with_transcript=0bp_to_ENST00000415392_5end | |association_with_transcript=0bp_to_ENST00000415392_5end | ||
|cluster_id=chr2:218990394..218990409,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_9_at_CXCR2_5end | |description=CAGE_peak_9_at_CXCR2_5end | ||
|id=chr2:218990394..218990409,+ | |id=chr2:218990394..218990409,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.22e-14!42;CL:0000763!2.77e-13!112;CL:0000049!2.77e-13!112;CL:0000766!3.11e-13!76;CL:0000860!6.76e-13!45;CL:0000775!9.26e-11!3;CL:0002194!1.78e-10!63;CL:0000576!1.78e-10!63;CL:0000040!1.78e-10!63;CL:0000559!1.78e-10!63;CL:0002009!5.01e-10!65;CL:0002032!3.25e-09!165;CL:0000837!3.25e-09!165;CL:0000839!5.10e-09!70;CL:0000557!7.78e-09!71;CL:0000037!1.52e-08!172;CL:0000566!1.52e-08!172;CL:0000988!1.10e-07!182;CL:0000738!5.84e-07!140;CL:0000094!8.70e-07!8 | |ontology_enrichment_celltype=CL:0002057!4.22e-14!42;CL:0000763!2.77e-13!112;CL:0000049!2.77e-13!112;CL:0000766!3.11e-13!76;CL:0000860!6.76e-13!45;CL:0000775!9.26e-11!3;CL:0002194!1.78e-10!63;CL:0000576!1.78e-10!63;CL:0000040!1.78e-10!63;CL:0000559!1.78e-10!63;CL:0002009!5.01e-10!65;CL:0002032!3.25e-09!165;CL:0000837!3.25e-09!165;CL:0000839!5.10e-09!70;CL:0000557!7.78e-09!71;CL:0000037!1.52e-08!172;CL:0000566!1.52e-08!172;CL:0000988!1.10e-07!182;CL:0000738!5.84e-07!140;CL:0000094!8.70e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000775;6.64e-41;3!CL:0000094;5.57e-27;8!CL:0000081;9.91e-20;11!CL:0000771;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.64e-41,3;CL:0000094,5.57e-27,8;CL:0000081,9.91e-20,11;CL:0000771,7.52e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-18!102;UBERON:0003061!1.29e-18!102;UBERON:0000178!2.83e-16!15;UBERON:0000179!2.83e-16!15;UBERON:0000463!2.83e-16!15;UBERON:0002193!2.92e-16!112;UBERON:0007023!1.39e-11!115;UBERON:0002371!2.15e-07!80;UBERON:0003081!2.41e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.13e-70;15!UBERON:0000179;2.13e-70;15!UBERON:0000463;2.13e-70;15!UBERON:0002390;7.28e-30;32!UBERON:0002193;1.30e-16;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.13e-70,15;UBERON:0000179,2.13e-70,15;UBERON:0000463,2.13e-70,15;UBERON:0002390,6.58e-15,98;UBERON:0003061,6.58e-15,98;UBERON:0002193,2.00e-13,108;UBERON:0004535,6.29e-09,109;UBERON:0001009,1.16e-08,112;UBERON:0007023,1.72e-08,114 | |||
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| ||
|short_description=p9@CXCR2 | |short_description=p9@CXCR2 | ||
}} | }} |
Latest revision as of 15:48, 24 September 2015
Short description: | p9@CXCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CXCR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000415392_5end |
EntrezGene: | CXCR2 |
HGNC: | 6027 |
UniProt: | C9J2F9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.64e-41 | 3 |
granulocyte | 5.57e-27 | 8 |
blood cell | 9.91e-20 | 11 |
eosinophil | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.13e-70 | 15 |
haemolymphatic fluid | 2.13e-70 | 15 |
organism substance | 2.13e-70 | 15 |
hematopoietic system | 6.58e-15 | 98 |
blood island | 6.58e-15 | 98 |
hemolymphoid system | 2.00e-13 | 108 |
cardiovascular system | 6.29e-09 | 109 |
circulatory system | 1.16e-08 | 112 |
adult organism | 1.72e-08 | 114 |