FFCP PHASE1:Hg19::chr2:218990832..218990844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3579 | |EntrezGene=3579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6027 | |HGNC=6027 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_uc002vha.1_5end | |association_with_transcript=86bp_to_uc002vha.1_5end | ||
|cluster_id=chr2:218990832..218990844,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_CXCR2_5end | |description=CAGE_peak_4_at_CXCR2_5end | ||
|id=chr2:218990832..218990844,+ | |id=chr2:218990832..218990844,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.62e-13!42;CL:0000766!9.84e-13!76;CL:0000738!1.65e-12!140;CL:0000860!7.12e-12!45;CL:0000775!2.91e-11!3;CL:0000094!8.70e-11!8;CL:0002087!7.61e-10!119;CL:0000037!1.21e-09!172;CL:0000566!1.21e-09!172;CL:0002032!1.79e-09!165;CL:0000837!1.79e-09!165;CL:0000988!1.02e-08!182;CL:0002194!1.81e-08!63;CL:0000576!1.81e-08!63;CL:0000040!1.81e-08!63;CL:0000559!1.81e-08!63;CL:0002031!2.77e-08!124;CL:0002009!4.20e-08!65;CL:0000771!5.66e-08!2;CL:0000763!6.39e-08!112;CL:0000049!6.39e-08!112;CL:0000081!1.02e-07!11;CL:0000839!2.76e-07!70;CL:0000557!3.89e-07!71 | |ontology_enrichment_celltype=CL:0002057!5.62e-13!42;CL:0000766!9.84e-13!76;CL:0000738!1.65e-12!140;CL:0000860!7.12e-12!45;CL:0000775!2.91e-11!3;CL:0000094!8.70e-11!8;CL:0002087!7.61e-10!119;CL:0000037!1.21e-09!172;CL:0000566!1.21e-09!172;CL:0002032!1.79e-09!165;CL:0000837!1.79e-09!165;CL:0000988!1.02e-08!182;CL:0002194!1.81e-08!63;CL:0000576!1.81e-08!63;CL:0000040!1.81e-08!63;CL:0000559!1.81e-08!63;CL:0002031!2.77e-08!124;CL:0002009!4.20e-08!65;CL:0000771!5.66e-08!2;CL:0000763!6.39e-08!112;CL:0000049!6.39e-08!112;CL:0000081!1.02e-07!11;CL:0000839!2.76e-07!70;CL:0000557!3.89e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000094;7.78e-25;8!CL:0000775;1.06e-24;3!CL:0000081;4.92e-18;11!CL:0000771;7.02e-17;2!CL:0000236;1.82e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.78e-25,8;CL:0000775,1.02e-24,3;CL:0000081,4.93e-18,11;CL:0000771,7.30e-17,2;CL:0000738,2.57e-11,136;CL:0002032,4.08e-09,161;CL:0000837,4.08e-09,161;CL:0000766,5.91e-09,72;CL:0000236,8.10e-09,14;CL:0000037,1.29e-08,168;CL:0000988,4.94e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.90e-21!15;UBERON:0000179!5.90e-21!15;UBERON:0000463!5.90e-21!15;UBERON:0002193!2.08e-17!112;UBERON:0002390!7.08e-17!102;UBERON:0003061!7.08e-17!102;UBERON:0007023!8.45e-14!115 | |ontology_enrichment_uberon=UBERON:0000178!5.90e-21!15;UBERON:0000179!5.90e-21!15;UBERON:0000463!5.90e-21!15;UBERON:0002193!2.08e-17!112;UBERON:0002390!7.08e-17!102;UBERON:0003061!7.08e-17!102;UBERON:0007023!8.45e-14!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.24e-41;15!UBERON:0000179;4.24e-41;15!UBERON:0000463;4.24e-41;15!UBERON:0002390;4.79e-17;32!UBERON:0002193;1.63e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.25e-41,15;UBERON:0000179,4.25e-41,15;UBERON:0000463,4.25e-41,15;UBERON:0002390,1.02e-12,98;UBERON:0003061,1.02e-12,98;UBERON:0002193,2.56e-11,108 | |||
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| ||
|short_description=p4@CXCR2 | |short_description=p4@CXCR2 | ||
}} | }} |
Latest revision as of 15:51, 24 September 2015
Short description: | p4@CXCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CXCR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 86bp_to_uc002vha.1_5end |
EntrezGene: | CXCR2 |
HGNC: | 6027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.78e-25 | 8 |
neutrophil | 1.02e-24 | 3 |
blood cell | 4.93e-18 | 11 |
eosinophil | 7.30e-17 | 2 |
leukocyte | 2.57e-11 | 136 |
hematopoietic oligopotent progenitor cell | 4.08e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-09 | 161 |
myeloid leukocyte | 5.91e-09 | 72 |
B cell | 8.10e-09 | 14 |
hematopoietic stem cell | 1.29e-08 | 168 |
hematopoietic cell | 4.94e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 4.25e-41 | 15 |
haemolymphatic fluid | 4.25e-41 | 15 |
organism substance | 4.25e-41 | 15 |
hematopoietic system | 1.02e-12 | 98 |
blood island | 1.02e-12 | 98 |
hemolymphoid system | 2.56e-11 | 108 |