FFCP PHASE1:Hg19::chr20:19869846..19869868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-150bp_to_ENST00000459721_5end | |association_with_transcript=-150bp_to_ENST00000459721_5end | ||
|cluster_id=chr20:19869846..19869868,+ | |||
|description=CAGE_peak_11_at_RIN2_5end | |description=CAGE_peak_11_at_RIN2_5end | ||
|id=chr20:19869846..19869868,+ | |id=chr20:19869846..19869868,+ |
Latest revision as of 16:08, 24 September 2015
Short description: | p11@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -150bp_to_ENST00000459721_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@RIN2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.26e-38 | 24 |
mesodermal cell | 1.58e-34 | 121 |
endothelial cell | 1.79e-32 | 36 |
lining cell | 2.13e-29 | 58 |
barrier cell | 2.13e-29 | 58 |
blood vessel endothelial cell | 3.24e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.24e-29 | 18 |
meso-epithelial cell | 7.39e-26 | 45 |
vascular associated smooth muscle cell | 5.94e-18 | 32 |
embryonic cell | 1.01e-15 | 250 |
Showing 1 to 10 of 26 entries
Ontology term | p-value | n |
---|---|---|
vessel | 1.73e-48 | 68 |
epithelial tube open at both ends | 1.33e-42 | 59 |
blood vessel | 1.33e-42 | 59 |
blood vasculature | 1.33e-42 | 59 |
vascular cord | 1.33e-42 | 59 |
vasculature | 9.71e-42 | 78 |
vascular system | 9.71e-42 | 78 |
splanchnic layer of lateral plate mesoderm | 7.55e-37 | 83 |
artery | 2.07e-33 | 42 |
arterial blood vessel | 2.07e-33 | 42 |
Showing 1 to 10 of 61 entries
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.09e-12 | 14 |
reproductive organ cancer | 1.45e-08 | 29 |
female reproductive organ cancer | 3.71e-08 | 27 |
Showing 1 to 3 of 3 entries