Personal tools

FFCP PHASE1:Hg19::chr20:19869846..19869868,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=54453
|EntrezGene=54453
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=18750
|HGNC=18750
|TSSclassifier=weak
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-150bp_to_ENST00000459721_5end
|association_with_transcript=-150bp_to_ENST00000459721_5end
|cluster_id=chr20:19869846..19869868,+
|description=CAGE_peak_11_at_RIN2_5end
|description=CAGE_peak_11_at_RIN2_5end
|id=chr20:19869846..19869868,+
|id=chr20:19869846..19869868,+

Latest revision as of 16:08, 24 September 2015

Short description:p11@RIN2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_11_at_RIN2_5end
Coexpression cluster:NA
Association with transcript: -150bp_to_ENST00000459721_5end
EntrezGene:RIN2
HGNC: 18750
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data