FFCP PHASE1:Hg19::chr7:99680302..99680329,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7551 | |EntrezGene=7551 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13089 | |HGNC=13089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_uc003ust.3_5end | |association_with_transcript=29bp_to_uc003ust.3_5end | ||
|cluster_id=chr7:99680302..99680329,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_5_at_ZNF3_5end | |description=CAGE_peak_5_at_ZNF3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!8.72e-07!254 | |ontology_enrichment_celltype=CL:0000066!8.72e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.63e-12;6!CL:0000404;1.63e-12;6 | |ontology_enrichment_celltype_v019=CL:0000540;1.63e-12;6!CL:0000404;1.63e-12;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.42e-12,6;CL:0000031,1.42e-12,6;CL:0000404,1.42e-12,6;CL:0000047,1.46e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.63e-12;6 | |ontology_enrichment_development_v019=CL:0000031;1.63e-12;6 | ||
|ontology_enrichment_disease=DOID:162!1.01e-10!235;DOID:14566!2.09e-10!239;DOID:305!1.87e-09!106;DOID:0050687!5.95e-08!143 | |ontology_enrichment_disease=DOID:162!1.01e-10!235;DOID:14566!2.09e-10!239;DOID:305!1.87e-09!106;DOID:0050687!5.95e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;8.65e-10;1!UBERON:0003703;8.65e-10;1!UBERON:0001174;8.65e-10;1!UBERON:0004914;8.65e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0004913;8.65e-10;1!UBERON:0003703;8.65e-10;1!UBERON:0001174;8.65e-10;1!UBERON:0004914;8.65e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,8.68e-10,1;UBERON:0003703,8.68e-10,1;UBERON:0001174,8.68e-10,1;UBERON:0004914,8.68e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.753255837568817,0.229240217243854,0.410502947249729,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0.46480320348181,0.426507697462265,0.293600439334847,0,0.401088894940283,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.378139268656271,0.443458794925128,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0.252320850875628,0.72995471815166,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.621984346622316,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0,0.224170287987055,0.985153801009636,0,1.02674429023799,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0.438519753291869,0.522870902049801,0.256450125116389,0.984043937099117,0.976135183992909,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0.743212700502875,0,0,0,0,0,0,0.324621940274555,0.561594356226918,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0,1.22587722705226,0.284136146806413,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0.755798243562828,0.306806047506464,0,0,0.179736702294654,0.895105873378046,0,0,0,0,0,0,0,0,0.174919999992391,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0.332423363800313,0.676786981851542,1.17637520590644,0.839107934879214,3.41556718903533,0.317873157960757,0.421996129056054,0.652931232636591,0,1.29833183845255,0,0,0,1.48260564340311,1.85345908419754,0.522109747527277,0,0,0,0.182454789215666,0.391329237864179,0.242780379534093,0,0,0,0.063186579628488,20.8949552986145,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0.0882561266915003,0,0,0.397429223405979,0.0633107959558787,0.391102765469606,0.160317640503067,0,0,0.432271251462318,0,0,1.7286575758578,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,2.32991899054908,0.157566364614447,0.329663433524666,0.539228350833479,1.27955725969173,0,0,0.136203406111576,0.643012593860077,1.78801267576404,1.24632101408756,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0.679872549120754,0,0,0.258565912723101,0,0,0,0,0,0,0,0.395223263795889,0.243585196761792,0,0.544017803369474,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0.332787154610557,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.521988583930423,0.226705925512272,0,0.734210113519403,0.179088841081487,0,0.657852148736121,0,1.54331230616732,0.506827321959218,0.76872455576384,0.345430341731199,1.51929978088691,0,0,0,0,0,0.983091635014877,0.633936370075881,0,0,0.344429959321631,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.589848616738702,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,5.32281910381363,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0,0,0,0.691403925334676,0,0.0679697329768317,0,0,0.333694205676207,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,2.90603563420313,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.196300467230486,0.121917924982269,0,0,0,0,0.467878926924211,0,0.118920090777569,0.45178432815584,0,1.50962843566674,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0.281951753939561,0.0644578879735772,0.199882311849858,0.178553938605658,0,0.401206833445841,0,0.458729283404541,0,0,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0.126698501011437,0.713921808193872,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0.672791175483681,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0.732629417498771,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.753255837568817,0.229240217243854,0.410502947249729,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0.46480320348181,0.426507697462265,0.293600439334847,0,0.401088894940283,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.378139268656271,0.443458794925128,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0.252320850875628,0.72995471815166,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.621984346622316,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0,0.224170287987055,0.985153801009636,0,1.02674429023799,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0.438519753291869,0.522870902049801,0.256450125116389,0.984043937099117,0.976135183992909,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0.743212700502875,0,0,0,0,0,0,0.324621940274555,0.561594356226918,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0,1.22587722705226,0.284136146806413,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0.755798243562828,0.306806047506464,0,0,0.179736702294654,0.895105873378046,0,0,0,0,0,0,0,0,0.174919999992391,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0.332423363800313,0.676786981851542,1.17637520590644,0.839107934879214,3.41556718903533,0.317873157960757,0.421996129056054,0.652931232636591,0,1.29833183845255,0,0,0,1.48260564340311,1.85345908419754,0.522109747527277,0,0,0,0.182454789215666,0.391329237864179,0.242780379534093,0,0,0,0.063186579628488,20.8949552986145,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0.0882561266915003,0,0,0.397429223405979,0.0633107959558787,0.391102765469606,0.160317640503067,0,0,0.432271251462318,0,0,1.7286575758578,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,2.32991899054908,0.157566364614447,0.329663433524666,0.539228350833479,1.27955725969173,0,0,0.136203406111576,0.643012593860077,1.78801267576404,1.24632101408756,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0,0,0.679872549120754,0,0,0.258565912723101,0,0,0,0,0,0,0,0.395223263795889,0.243585196761792,0,0.544017803369474,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0.332787154610557,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.521988583930423,0.226705925512272,0,0.734210113519403,0.179088841081487,0,0.657852148736121,0,1.54331230616732,0.506827321959218,0.76872455576384,0.345430341731199,1.51929978088691,0,0,0,0,0,0.983091635014877,0.633936370075881,0,0,0.344429959321631,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.589848616738702,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,5.32281910381363,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0,0,0,0.691403925334676,0,0.0679697329768317,0,0,0.333694205676207,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,2.90603563420313,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.196300467230486,0.121917924982269,0,0,0,0,0.467878926924211,0,0.118920090777569,0.45178432815584,0,1.50962843566674,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0.281951753939561,0.0644578879735772,0.199882311849858,0.178553938605658,0,0.401206833445841,0,0.458729283404541,0,0,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0.126698501011437,0.713921808193872,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0.672791175483681,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0.732629417498771,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p5@ZNF3 | |short_description=p5@ZNF3 | ||
}} | }} |
Latest revision as of 17:04, 24 September 2015
Short description: | p5@ZNF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ZNF3_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 29bp_to_uc003ust.3_5end |
EntrezGene: | ZNF3 |
HGNC: | 13089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.42e-12 | 6 |
neuroblast | 1.42e-12 | 6 |
electrically signaling cell | 1.42e-12 | 6 |
neuronal stem cell | 1.46e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 8.68e-10 | 1 |
extrahepatic bile duct | 8.68e-10 | 1 |
common bile duct | 8.68e-10 | 1 |
duodenal papilla | 8.68e-10 | 1 |