FFCP PHASE1:Hg19::chr7:99712333..99712335,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6878 | |EntrezGene=6878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11540 | |HGNC=11540 | ||
|TSSclassifier=strong | |||
|UniProt=P49848 | |UniProt=P49848 | ||
|association_with_transcript=-152bp_to_ENST00000472509_5end | |association_with_transcript=-152bp_to_ENST00000472509_5end | ||
|cluster_id=chr7:99712333..99712335,- | |||
|description=CAGE_peak_6_at_TAF6_5end | |description=CAGE_peak_6_at_TAF6_5end | ||
|id=chr7:99712333..99712335,- | |id=chr7:99712333..99712335,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.05e-29;1!CL:0000911;2.05e-29;1!CL:0000814;2.05e-29;1!CL:0002521;6.73e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.33e-29,1;CL:0000914,1.33e-29,1;CL:0000911,1.33e-29,1;CL:0000814,1.33e-29,1;CL:0002042,1.33e-29,1;CL:0002039,1.33e-29,1;CL:0002040,1.33e-29,1;CL:0002041,1.33e-29,1;CL:0000893,1.54e-15,2;CL:0002489,1.54e-15,2;CL:0000809,1.54e-15,2;CL:0000808,1.54e-15,2;CL:0000894,1.54e-15,2;CL:0000806,1.54e-15,2;CL:0000807,1.54e-15,2;CL:0000805,1.54e-15,2;CL:0002425,1.54e-15,2;CL:0002521,6.73e-11,3 | |||
|ontology_enrichment_development_v019=CL:0002425;1.91e-15;2 | |||
|ontology_enrichment_disease=DOID:162!4.56e-13!235;DOID:14566!5.61e-13!239;DOID:0050687!8.90e-12!143;DOID:305!1.86e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:17;5.86e-07;5!DOID:450;5.86e-07;5!DOID:66;5.86e-07;5!DOID:423;5.86e-07;5!DOID:0080000;5.86e-07;5!DOID:11722;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.70e-07,5;DOID:450,5.70e-07,5;DOID:66,5.70e-07,5;DOID:423,5.70e-07,5;DOID:0080000,5.70e-07,5;DOID:11722,5.70e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;6.73e-11;3!UBERON:0002072;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,6.73e-11,3;UBERON:0002370,1.96e-08,4;UBERON:0005058,1.96e-08,4;UBERON:0009113,1.96e-08,4;UBERON:0003295,1.96e-08,4;UBERON:0005562,1.96e-08,4;UBERON:0002072,4.79e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,0,0.46480320348181,0.568676929949686,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0.366403487860815,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,1.20036438433761,0.103052529238439,0.257640540045629,0,0.506328996723799,0.292311015483596,0.757301322732344,0,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,1.56919201590938,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,0.325378394664303,0.103041011647722,0.640986253728404,0,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0.426133137080504,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0.962479855263359,0,0.371606350251437,0,0,0.318852545457645,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.481764225311099,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0.284136146806413,0,0,0,0,0.422008249231538,0,0.824019371133798,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,1.0241410345695,0.254253650292766,0.709163045303809,1.03423011972439,0.874813840149763,0.520874984799877,0,0,0,0,0.295547618953547,0,0.21787692703798,0,0.0769502585037971,0,0.23056390438806,0,0.869178975376065,0,0,0,0,0,0.332423363800313,0.225595660617181,0,0,0,0,0.421996129056054,0,0.141353071433941,0.216388639742091,0,0,0,0,0.370691816839509,0.104421949505455,0,0,0,0.91227394607833,0.19566461893209,0,0,0,0.61214552326098,0.189559738885464,0,0.311064574191741,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0.343972064943233,0.774050650312681,0.146178634172371,0.328461828212837,0,0.0882561266915003,0,0.137041924646751,0.596143835108969,0.316553979779393,0.195551382734803,0,0.426905989478705,0,0,0.229073192331831,0.343189995723929,0.288109595976299,0.124252535565433,0,0.543616824294456,0.209205692624666,0.509991088181609,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0.315132729228895,0.329663433524666,0.0674035438541849,0,0.169346664131569,0.795229689809303,0.136203406111576,0.482259445395058,0.550157746388935,0,0,0,0.182248669974074,0,0,0.314727528809989,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0.226624183040251,0,0,0,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0.124980407962107,0.151649117541648,0,0,0.468334905806882,0.28984205722165,0,0,0,0.189403005275089,0,0,0.228840068396924,0.453692771289717,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.337884881306145,0,0.345430341731199,0,0.276516872303462,0.194860308839388,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.314531883711793,0.109209638192014,0.848662649770126,0.212574920101683,0.991486114072017,0,0,0.157723490002507,0,0,0,0.128458450192919,0,0.798169295285756,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0.887136517302272,0.135075169236789,0.781078098613847,0.206686796501184,0,0.546974809018219,0,0,0.351742488719241,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0.135939465953663,0.328863867814245,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0.158013611732727,0.464965701472501,0.869291361512897,0,0,0.17071847709395,0.691259661814092,0,0.118332000730565,0.340853619036631,0,0,0,0,0.559277158988962,0.098150233615243,0,0,0,0,0.485710993059139,0,0.198950775161368,0.237840181555137,0.45178432815584,0,0.754814217833368,0.154348316215889,0.218559560503957,0,0,0.707029641304878,0,0,0.4226557275834,0.339854229375634,0,0,0.0999411559249289,0.357107877211315,0,0.240724100067505,0,0,0.573358332605805,0.473314686579554,0.135982980381829,0,0,0,0.462175628631418,0,0.126166424835079,0.764859003745869,0.886889507080059,0.305966489225945,0.534434810531121,0.643264296743914,0,0,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,0,0.46480320348181,0.568676929949686,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0,0,0,0.366403487860815,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,1.20036438433761,0.103052529238439,0.257640540045629,0,0.506328996723799,0.292311015483596,0.757301322732344,0,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,1.56919201590938,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,0.325378394664303,0.103041011647722,0.640986253728404,0,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0.426133137080504,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0.962479855263359,0,0.371606350251437,0,0,0.318852545457645,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.481764225311099,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0.284136146806413,0,0,0,0,0.422008249231538,0,0.824019371133798,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,1.0241410345695,0.254253650292766,0.709163045303809,1.03423011972439,0.874813840149763,0.520874984799877,0,0,0,0,0.295547618953547,0,0.21787692703798,0,0.0769502585037971,0,0.23056390438806,0,0.869178975376065,0,0,0,0,0,0.332423363800313,0.225595660617181,0,0,0,0,0.421996129056054,0,0.141353071433941,0.216388639742091,0,0,0,0,0.370691816839509,0.104421949505455,0,0,0,0.91227394607833,0.19566461893209,0,0,0,0.61214552326098,0.189559738885464,0,0.311064574191741,0,0.330991955875499,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0.343972064943233,0.774050650312681,0.146178634172371,0.328461828212837,0,0.0882561266915003,0,0.137041924646751,0.596143835108969,0.316553979779393,0.195551382734803,0,0.426905989478705,0,0,0.229073192331831,0.343189995723929,0.288109595976299,0.124252535565433,0,0.543616824294456,0.209205692624666,0.509991088181609,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0.315132729228895,0.329663433524666,0.0674035438541849,0,0.169346664131569,0.795229689809303,0.136203406111576,0.482259445395058,0.550157746388935,0,0,0,0.182248669974074,0,0,0.314727528809989,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0.226624183040251,0,0,0,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0.124980407962107,0.151649117541648,0,0,0.468334905806882,0.28984205722165,0,0,0,0.189403005275089,0,0,0.228840068396924,0.453692771289717,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.337884881306145,0,0.345430341731199,0,0.276516872303462,0.194860308839388,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.314531883711793,0.109209638192014,0.848662649770126,0.212574920101683,0.991486114072017,0,0,0.157723490002507,0,0,0,0.128458450192919,0,0.798169295285756,0.205116364240755,0,0.207471757392654,0.484426936895553,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0.887136517302272,0.135075169236789,0.781078098613847,0.206686796501184,0,0.546974809018219,0,0,0.351742488719241,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0.135939465953663,0.328863867814245,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0.158013611732727,0.464965701472501,0.869291361512897,0,0,0.17071847709395,0.691259661814092,0,0.118332000730565,0.340853619036631,0,0,0,0,0.559277158988962,0.098150233615243,0,0,0,0,0.485710993059139,0,0.198950775161368,0.237840181555137,0.45178432815584,0,0.754814217833368,0.154348316215889,0.218559560503957,0,0,0.707029641304878,0,0,0.4226557275834,0.339854229375634,0,0,0.0999411559249289,0.357107877211315,0,0.240724100067505,0,0,0.573358332605805,0.473314686579554,0.135982980381829,0,0,0,0.462175628631418,0,0.126166424835079,0.764859003745869,0.886889507080059,0.305966489225945,0.534434810531121,0.643264296743914,0,0,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p6@TAF6 | |short_description=p6@TAF6 | ||
}} | }} |
Latest revision as of 17:30, 24 September 2015
Short description: | p6@TAF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TAF6_5end |
Coexpression cluster: | NA |
Association with transcript: | -152bp_to_ENST00000472509_5end |
EntrezGene: | TAF6 |
HGNC: | 11540 |
UniProt: | P49848 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.33e-29 | 1 |
immature NK T cell | 1.33e-29 | 1 |
effector T cell | 1.33e-29 | 1 |
mature NK T cell | 1.33e-29 | 1 |
immature NK T cell stage IV | 1.33e-29 | 1 |
immature NK T cell stage I | 1.33e-29 | 1 |
immature NK T cell stage II | 1.33e-29 | 1 |
immature NK T cell stage III | 1.33e-29 | 1 |
thymocyte | 1.54e-15 | 2 |
double negative thymocyte | 1.54e-15 | 2 |
double-positive, alpha-beta thymocyte | 1.54e-15 | 2 |
DN4 thymocyte | 1.54e-15 | 2 |
DN1 thymic pro-T cell | 1.54e-15 | 2 |
DN2 thymocyte | 1.54e-15 | 2 |
DN3 thymocyte | 1.54e-15 | 2 |
immature single positive thymocyte | 1.54e-15 | 2 |
early T lineage precursor | 1.54e-15 | 2 |
subcutaneous fat cell | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 6.73e-11 | 3 |
thymus | 1.96e-08 | 4 |
hemolymphoid system gland | 1.96e-08 | 4 |
thymic region | 1.96e-08 | 4 |
pharyngeal gland | 1.96e-08 | 4 |
thymus primordium | 1.96e-08 | 4 |
hypodermis | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.70e-07 | 5 |
myotonic disease | 5.70e-07 | 5 |
muscle tissue disease | 5.70e-07 | 5 |
myopathy | 5.70e-07 | 5 |
muscular disease | 5.70e-07 | 5 |
myotonic dystrophy | 5.70e-07 | 5 |