FFCP PHASE1:Hg19::chr2:219433617..219433629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9125 | |EntrezGene=9125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10445 | |HGNC=10445 | ||
|TSSclassifier=strong | |||
|UniProt=B5MDQ4 | |UniProt=B5MDQ4 | ||
|association_with_transcript=19bp_to_ENST00000295701_5end | |association_with_transcript=19bp_to_ENST00000295701_5end | ||
|cluster_id=chr2:219433617..219433629,+ | |||
|coexpression_cluster_id=C4185 | |||
|description=CAGE_peak_5_at_RQCD1_5end | |description=CAGE_peak_5_at_RQCD1_5end | ||
|id=chr2:219433617..219433629,+ | |id=chr2:219433617..219433629,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.93e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.08e-07,10;CL:0000541,1.08e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.75e-13!235;DOID:14566!2.69e-12!239;DOID:0050687!4.43e-07!143;DOID:0050686!7.62e-07!137 | |ontology_enrichment_disease=DOID:162!4.75e-13!235;DOID:14566!2.69e-12!239;DOID:0050687!4.43e-07!143;DOID:0050686!7.62e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.58e-10,235;DOID:14566,1.02e-09,239;DOID:0060058,2.55e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0005743!5.27e-08!86;UBERON:0001017!9.54e-08!82;UBERON:0000073!1.03e-07!94;UBERON:0001016!1.03e-07!94;UBERON:0001049!7.34e-07!57;UBERON:0005068!7.34e-07!57;UBERON:0006241!7.34e-07!57;UBERON:0007135!7.34e-07!57 | |ontology_enrichment_uberon=UBERON:0005743!5.27e-08!86;UBERON:0001017!9.54e-08!82;UBERON:0000073!1.03e-07!94;UBERON:0001016!1.03e-07!94;UBERON:0001049!7.34e-07!57;UBERON:0005068!7.34e-07!57;UBERON:0006241!7.34e-07!57;UBERON:0007135!7.34e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,1.39560233594486,0,0.263766978228454,0.37129905888014,0,2.01697543935533,0,0,0.487932798790507,1.10808952269109,1.22400414746552,0.940364164434263,0.85870796139317,1.09499540058307,1.12988375635323,2.06316195519468,2.21671591514854,1.96776953284198,0,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,3.17615522379237,2.55904618477359,0.587200878669695,0,0.601633342410425,0.651032612147555,0.447830948479849,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,1.24564449799115,0.251248665256743,0,0.65156653411535,0,0,0,0.422510572623884,0.425208599930087,0,0.336985893439485,0.300353785683013,0.32145117339416,0,0,0,0,0,0,1.70692089026603,0,1.14950487990897,0,0,1.1384259382189,1.76171156811282,0.382273228125229,0,0,1.05353633910031,0.590129310341499,1.17903228824749,1.43921049299656,0,0.651844533267181,1.89379122293893,0,1.11410456885174,0.294605907474837,1.10766947291811,0.541607727530031,0.384273959177026,0.390178042679635,0.328875809207352,1.93445012450094,0.579606171470105,0.296573126324121,0.535081656179426,0,1.13309342697566,0.383220493601921,0.68725489096526,0.506039384039006,1.59282707162048,1.95325036156926,0,1.05402583354441,0.639933055772092,0,0.473554504088034,0.821127996921047,1.00803371612366,1.06976078313403,0.724122019413995,0,1.34140171940727,0.383587685530591,0.722878304769133,0.50133791063589,0,0,0.486634870302636,1.22895262313288,0.443458794925128,1.14185221401064,1.0478326039817,0,0.741568885568859,0.324547393654683,0.870648686496336,0.531831842075461,0.476981248610684,0,0.371457501329565,0.79504962946682,0.860234595106124,0.694281003215189,2.26123176769604,0.838998872419812,0.275118041940067,1.67195973229448,1.03366703667732,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,1.22031028774085,1.10298924103761,0,2.23249320710199,1.34717623575702,1.12611480483322,1.53316637465883,0.949265659568129,2.01521918323448,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0,0,0.560677600142307,0,0.49333509683432,0,2.42479209725439,0.653847612453835,1.21085942115945,0.576175924479999,1.40592859100278,0.312160076830321,0,0.298897361103602,1.40921398372518,0.161872944368132,0.561803226808994,0.408308342509787,0.61417158655884,0.413303124703062,0,0.989067717114227,0.910161361938026,0.718618141816238,0.673344455816265,0.875829639103749,2.77064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,0.89694817844431,0.213557388818567,0.211931901159562,0,0.515262646192195,0,1.11670113798954,0.675105328965065,0.389748020644795,0,0.0920498986422993,0.80823028409406,0.355009592516614,0.302256294682921,0.339121184620975,0.193260853163297,0,0.286804595389004,9.02605425359006,10.8674410023618,7.55260628651869,6.21966330092223,7.56962552626885,8.39447925874409,1.56449532329816,0.643240938192885,0,1.85747171212792,2.16563844500876,1.18306800039844,0.505754070234305,1.20505514941741,1.21323370005633,0.653638332277218,0.474541238222193,0.943819157121151,1.96221465125346,0.769494313892781,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,1.32438929824395,1.72183813960359,0.343135620597051,0.219500570817251,0,0.703702806881416,0.648119116109707,0.325808305310325,1.03993478527958,2.88662684050547,1.39116485970092,0.352226082707465,1.73239737313289,0.462985512576611,0.951270761172991,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0.93733833986777,0,0.567100388969546,0.806026704325635,1.16253575405585,0.383382679165211,2.95597942737566,0.704387472105808,1.24396869324463,1.29707958075265,1.8936365013957,2.03193261734941,3.05590740446622,3.51652341630141,1.71072446022705,1.64523988325318,2.10240140490742,1.42913216315289,2.35475277125258,4.79556075716608,1.39342743059805,0.258543431515556,0,0,1.06375246633948,1.04007436911366,0.514414748524284,0,1.0656887160644,0.714889968290738,1.08524321078289,0.823240336780769,0.977208552881205,2.13235169245527,0.791951872933429,0.602878754119172,0,0.299918973546171,0,1.00451418286425,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.821905290201534,0.179060963239896,9.19098180746924,0.985153801009636,1.50939302401662,1.02674429023799,1.77866236955724,0,0,0.502548796003046,1.91381625495949,0,0,0,0.36807447515742,0.500170521059677,0,0,0.713715955188647,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,1.17480694477644,1.02943027143257,0.413536052245775,0.862856803274467,0.960548020230999,0.303127571446259,0,0.30239029332968,0.744323423456331,0.61384789315225,0.280660094433074,0.640695746278505,0,0.64341568457443,0,0.771048469013278,0.532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| ||
|short_description=p5@RQCD1 | |short_description=p5@RQCD1 | ||
}} | }} |
Latest revision as of 17:50, 24 September 2015
Short description: | p5@RQCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RQCD1_5end |
Coexpression cluster: | C4185_teratocarcinoma_iPS_H9_HES3GFP_NK_diffuse_rhabdomyosarcoma |
Association with transcript: | 19bp_to_ENST00000295701_5end |
EntrezGene: | RQCD1 |
HGNC: | 10445 |
UniProt: | B5MDQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.08e-07 | 10 |
melanoblast | 1.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.58e-10 | 235 |
disease of cellular proliferation | 1.02e-09 | 239 |
lymphoma | 2.55e-07 | 10 |