FFCP PHASE1:Hg19::chr6:131277773..131277818,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2037 | |EntrezGene=2037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3379 | |HGNC=3379 | ||
|TSSclassifier=strong | |||
|UniProt=E9PII3,E9PK52 | |UniProt=E9PII3,E9PK52 | ||
|association_with_transcript=-148bp_to_ENST00000525193,ENST00000527659_5end | |association_with_transcript=-148bp_to_ENST00000525193,ENST00000527659_5end | ||
|cluster_id=chr6:131277773..131277818,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_16_at_EPB41L2_5end | |description=CAGE_peak_16_at_EPB41L2_5end | ||
|id=chr6:131277773..131277818,- | |id=chr6:131277773..131277818,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.12e-08;3!CL:0000737;8.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.12e-08,3;CL:0000513,1.12e-08,3;CL:0000737,8.14e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!CL:0000513;1.12e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.25e-39!20;UBERON:0002619!6.07e-36!22;UBERON:0001869!1.87e-32!32;UBERON:0000956!1.77e-31!25;UBERON:0000203!1.77e-31!25;UBERON:0001893!2.07e-30!34;UBERON:0002020!2.21e-30!34;UBERON:0003528!2.21e-30!34;UBERON:0002780!2.49e-28!41;UBERON:0001890!2.49e-28!41;UBERON:0006240!2.49e-28!41;UBERON:0003080!1.37e-27!42;UBERON:0002791!3.20e-27!33;UBERON:0001872!1.76e-26!5;UBERON:0001049!5.34e-25!57;UBERON:0005068!5.34e-25!57;UBERON:0006241!5.34e-25!57;UBERON:0007135!5.34e-25!57;UBERON:0001017!6.82e-25!82;UBERON:0000955!9.38e-25!69;UBERON:0006238!9.38e-25!69;UBERON:0002616!4.96e-24!59;UBERON:0005743!1.55e-23!86;UBERON:0007023!6.31e-23!115;UBERON:0000200!3.42e-22!6;UBERON:0003075!1.77e-21!86;UBERON:0007284!1.77e-21!86;UBERON:0000073!6.75e-21!94;UBERON:0001016!6.75e-21!94;UBERON:0003056!1.68e-20!61;UBERON:0002346!2.51e-20!90;UBERON:0000033!3.58e-15!123;UBERON:0000153!2.96e-14!129;UBERON:0007811!2.96e-14!129;UBERON:0001870!6.07e-12!2;UBERON:0002360!4.97e-11!2;UBERON:0000094!4.97e-11!2;UBERON:0007645!4.97e-11!2;UBERON:0004121!8.80e-11!169;UBERON:0000924!2.00e-10!173;UBERON:0006601!2.00e-10!173;UBERON:0002771!3.43e-08!3;UBERON:0000988!1.37e-07!3;UBERON:0003112!8.21e-07!1;UBERON:0000032!8.21e-07!1;UBERON:0005253!8.21e-07!1;UBERON:0003128!8.21e-07!1;UBERON:0002241!8.21e-07!1;UBERON:0001703!8.21e-07!1;UBERON:0004761!8.21e-07!1;UBERON:0009617!8.21e-07!1;UBERON:0002702!9.15e-07!1 | |ontology_enrichment_uberon=UBERON:0001950!1.25e-39!20;UBERON:0002619!6.07e-36!22;UBERON:0001869!1.87e-32!32;UBERON:0000956!1.77e-31!25;UBERON:0000203!1.77e-31!25;UBERON:0001893!2.07e-30!34;UBERON:0002020!2.21e-30!34;UBERON:0003528!2.21e-30!34;UBERON:0002780!2.49e-28!41;UBERON:0001890!2.49e-28!41;UBERON:0006240!2.49e-28!41;UBERON:0003080!1.37e-27!42;UBERON:0002791!3.20e-27!33;UBERON:0001872!1.76e-26!5;UBERON:0001049!5.34e-25!57;UBERON:0005068!5.34e-25!57;UBERON:0006241!5.34e-25!57;UBERON:0007135!5.34e-25!57;UBERON:0001017!6.82e-25!82;UBERON:0000955!9.38e-25!69;UBERON:0006238!9.38e-25!69;UBERON:0002616!4.96e-24!59;UBERON:0005743!1.55e-23!86;UBERON:0007023!6.31e-23!115;UBERON:0000200!3.42e-22!6;UBERON:0003075!1.77e-21!86;UBERON:0007284!1.77e-21!86;UBERON:0000073!6.75e-21!94;UBERON:0001016!6.75e-21!94;UBERON:0003056!1.68e-20!61;UBERON:0002346!2.51e-20!90;UBERON:0000033!3.58e-15!123;UBERON:0000153!2.96e-14!129;UBERON:0007811!2.96e-14!129;UBERON:0001870!6.07e-12!2;UBERON:0002360!4.97e-11!2;UBERON:0000094!4.97e-11!2;UBERON:0007645!4.97e-11!2;UBERON:0004121!8.80e-11!169;UBERON:0000924!2.00e-10!173;UBERON:0006601!2.00e-10!173;UBERON:0002771!3.43e-08!3;UBERON:0000988!1.37e-07!3;UBERON:0003112!8.21e-07!1;UBERON:0000032!8.21e-07!1;UBERON:0005253!8.21e-07!1;UBERON:0003128!8.21e-07!1;UBERON:0002241!8.21e-07!1;UBERON:0001703!8.21e-07!1;UBERON:0004761!8.21e-07!1;UBERON:0009617!8.21e-07!1;UBERON:0002702!9.15e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001870;6.50e-30;3!UBERON:0003112;4.59e-23;1!UBERON:0011158;4.59e-23;1!UBERON:0003128;4.59e-23;1!UBERON:0001703;4.59e-23;1!UBERON:0002241;4.59e-23;1!UBERON:0002702;3.06e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0001950;5.11e-10;20!UBERON:0002619;3.35e-09;22!UBERON:0003135;4.08e-09;11!UBERON:0000956;3.28e-08;25!UBERON:0000203;3.28e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001870,7.54e-30,3;UBERON:0003112,5.13e-23,1;UBERON:0011158,5.13e-23,1;UBERON:0003128,5.13e-23,1;UBERON:0001703,5.13e-23,1;UBERON:0002241,5.13e-23,1;UBERON:0004761,5.13e-23,1;UBERON:0009617,5.13e-23,1;UBERON:0005253,3.24e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0002702,3.62e-12,2;UBERON:0001950,5.03e-10,20;UBERON:0002619,3.30e-09,22;UBERON:0003135,4.08e-09,11;UBERON:0000956,3.24e-08,25;UBERON:0000203,3.24e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,9.10304574709103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,1.45614830698521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,1.251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.138314504928436,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.405225507710368,1.56215619722769,0.826747186004736,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,19.0204532527781,19.2934173712448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,9.10304574709103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,1.45614830698521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,1.251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.138314504928436,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.405225507710368,1.56215619722769,0.826747186004736,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,19.0204532527781,19.2934173712448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@EPB41L2 | |short_description=p16@EPB41L2 | ||
}} | }} |
Latest revision as of 17:58, 24 September 2015
Short description: | p16@EPB41L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_EPB41L2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -148bp_to_ENST00000525193, ENST00000527659_5end |
EntrezGene: | EPB41L2 |
HGNC: | 3379 |
UniProt: | E9PII3E9PK52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.12e-08 | 3 |
cardiac muscle myoblast | 1.12e-08 | 3 |
striated muscle cell | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
frontal cortex | 7.54e-30 | 3 |
olfactory region | 5.13e-23 | 1 |
primary subdivision of skull | 5.13e-23 | 1 |
cranium | 5.13e-23 | 1 |
neurocranium | 5.13e-23 | 1 |
chondrocranium | 5.13e-23 | 1 |
cartilaginous neurocranium | 5.13e-23 | 1 |
head paraxial mesoderm | 5.13e-23 | 1 |
head mesenchyme | 3.24e-12 | 2 |
testis | 3.54e-12 | 8 |
middle frontal gyrus | 3.62e-12 | 2 |
neocortex | 5.03e-10 | 20 |
regional part of cerebral cortex | 3.30e-09 | 22 |
male reproductive organ | 4.08e-09 | 11 |
cerebral cortex | 3.24e-08 | 25 |
pallium | 3.24e-08 | 25 |