FFCP PHASE1:Hg19::chr20:21494424..21494431,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4821 | |EntrezGene=4821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7835 | |HGNC=7835 | ||
|TSSclassifier=strong | |||
|UniProt=O95096 | |UniProt=O95096 | ||
|association_with_transcript=232bp_to_ENST00000377142,NM_002509,uc002wsi.2_5end | |association_with_transcript=232bp_to_ENST00000377142,NM_002509,uc002wsi.2_5end | ||
|cluster_id=chr20:21494424..21494431,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_11_at_NKX2-2_5end | |description=CAGE_peak_11_at_NKX2-2_5end | ||
|id=chr20:21494424..21494431,- | |id=chr20:21494424..21494431,- | ||
|ontology_enrichment_celltype=CL:0002535!2.00e-08!2 | |ontology_enrichment_celltype=CL:0002535!2.00e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3910!1.73e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002298!1.49e-28!8;UBERON:0002308!1.12e-25!9;UBERON:0000125!1.12e-25!9;UBERON:0001049!2.03e-23!57;UBERON:0005068!2.03e-23!57;UBERON:0006241!2.03e-23!57;UBERON:0007135!2.03e-23!57;UBERON:0006331!4.02e-20!3;UBERON:0001896!1.39e-19!3;UBERON:0005290!1.39e-19!3;UBERON:0010096!1.39e-19!3;UBERON:0009663!4.93e-19!7;UBERON:0002616!2.94e-18!59;UBERON:0002346!8.91e-18!90;UBERON:0001017!7.11e-16!82;UBERON:0002038!7.46e-16!1;UBERON:0009661!7.46e-16!1;UBERON:0002336!1.78e-15!1;UBERON:0001018!1.78e-15!1;UBERON:0002473!1.78e-15!1;UBERON:0005340!1.78e-15!1;UBERON:0002316!1.78e-15!1;UBERON:0003544!1.78e-15!1;UBERON:0001020!1.78e-15!1;UBERON:0005970!1.78e-15!1;UBERON:0002437!1.78e-15!1;UBERON:0001874!2.06e-15!1;UBERON:0003076!2.22e-15!15;UBERON:0003057!2.22e-15!15;UBERON:0000955!2.66e-15!69;UBERON:0006238!2.66e-15!69;UBERON:0003075!2.72e-15!86;UBERON:0007284!2.72e-15!86;UBERON:0005743!4.16e-15!86;UBERON:0002420!5.94e-15!9;UBERON:0007245!5.94e-15!9;UBERON:0010009!5.94e-15!9;UBERON:0010011!5.94e-15!9;UBERON:0000454!5.94e-15!9;UBERON:0007023!9.38e-14!115;UBERON:0000073!1.30e-13!94;UBERON:0001016!1.30e-13!94;UBERON:0002780!5.82e-12!41;UBERON:0001890!5.82e-12!41;UBERON:0006240!5.82e-12!41;UBERON:0003080!1.12e-11!42;UBERON:0004733!3.60e-11!12;UBERON:0002028!3.60e-11!12;UBERON:0007277!3.60e-11!12;UBERON:0004732!2.35e-10!13;UBERON:0001894!4.39e-09!7;UBERON:0006222!4.39e-09!7;UBERON:0000007!1.29e-08!2;UBERON:0000924!1.30e-08!173;UBERON:0006601!1.30e-08!173;UBERON:0002950!1.39e-08!2;UBERON:0001891!1.39e-08!2;UBERON:0009616!1.39e-08!2;UBERON:0001875!1.50e-08!2;UBERON:0006514!1.50e-08!2;UBERON:0004903!1.73e-08!2;UBERON:0002173!1.73e-08!2;UBERON:0002186!1.73e-08!2;UBERON:0002148!1.86e-08!2;UBERON:0009662!1.86e-08!2;UBERON:0006955!2.00e-08!2;UBERON:0004801!2.00e-08!2;UBERON:0005162!2.15e-08!2;UBERON:0000122!2.15e-08!2;UBERON:0000033!2.68e-08!123;UBERON:0001897!2.87e-08!2;UBERON:0003056!5.24e-08!61;UBERON:0000153!7.12e-08!129;UBERON:0007811!7.12e-08!129;UBERON:0000025!1.24e-07!194;UBERON:0004121!3.40e-07!169;UBERON:0002791!5.45e-07!33;UBERON:0002020!8.27e-07!34;UBERON:0003528!8.27e-07!34;UBERON:0001893!8.53e-07!34 | |ontology_enrichment_uberon=UBERON:0002298!1.49e-28!8;UBERON:0002308!1.12e-25!9;UBERON:0000125!1.12e-25!9;UBERON:0001049!2.03e-23!57;UBERON:0005068!2.03e-23!57;UBERON:0006241!2.03e-23!57;UBERON:0007135!2.03e-23!57;UBERON:0006331!4.02e-20!3;UBERON:0001896!1.39e-19!3;UBERON:0005290!1.39e-19!3;UBERON:0010096!1.39e-19!3;UBERON:0009663!4.93e-19!7;UBERON:0002616!2.94e-18!59;UBERON:0002346!8.91e-18!90;UBERON:0001017!7.11e-16!82;UBERON:0002038!7.46e-16!1;UBERON:0009661!7.46e-16!1;UBERON:0002336!1.78e-15!1;UBERON:0001018!1.78e-15!1;UBERON:0002473!1.78e-15!1;UBERON:0005340!1.78e-15!1;UBERON:0002316!1.78e-15!1;UBERON:0003544!1.78e-15!1;UBERON:0001020!1.78e-15!1;UBERON:0005970!1.78e-15!1;UBERON:0002437!1.78e-15!1;UBERON:0001874!2.06e-15!1;UBERON:0003076!2.22e-15!15;UBERON:0003057!2.22e-15!15;UBERON:0000955!2.66e-15!69;UBERON:0006238!2.66e-15!69;UBERON:0003075!2.72e-15!86;UBERON:0007284!2.72e-15!86;UBERON:0005743!4.16e-15!86;UBERON:0002420!5.94e-15!9;UBERON:0007245!5.94e-15!9;UBERON:0010009!5.94e-15!9;UBERON:0010011!5.94e-15!9;UBERON:0000454!5.94e-15!9;UBERON:0007023!9.38e-14!115;UBERON:0000073!1.30e-13!94;UBERON:0001016!1.30e-13!94;UBERON:0002780!5.82e-12!41;UBERON:0001890!5.82e-12!41;UBERON:0006240!5.82e-12!41;UBERON:0003080!1.12e-11!42;UBERON:0004733!3.60e-11!12;UBERON:0002028!3.60e-11!12;UBERON:0007277!3.60e-11!12;UBERON:0004732!2.35e-10!13;UBERON:0001894!4.39e-09!7;UBERON:0006222!4.39e-09!7;UBERON:0000007!1.29e-08!2;UBERON:0000924!1.30e-08!173;UBERON:0006601!1.30e-08!173;UBERON:0002950!1.39e-08!2;UBERON:0001891!1.39e-08!2;UBERON:0009616!1.39e-08!2;UBERON:0001875!1.50e-08!2;UBERON:0006514!1.50e-08!2;UBERON:0004903!1.73e-08!2;UBERON:0002173!1.73e-08!2;UBERON:0002186!1.73e-08!2;UBERON:0002148!1.86e-08!2;UBERON:0009662!1.86e-08!2;UBERON:0006955!2.00e-08!2;UBERON:0004801!2.00e-08!2;UBERON:0005162!2.15e-08!2;UBERON:0000122!2.15e-08!2;UBERON:0000033!2.68e-08!123;UBERON:0001897!2.87e-08!2;UBERON:0003056!5.24e-08!61;UBERON:0000153!7.12e-08!129;UBERON:0007811!7.12e-08!129;UBERON:0000025!1.24e-07!194;UBERON:0004121!3.40e-07!169;UBERON:0002791!5.45e-07!33;UBERON:0002020!8.27e-07!34;UBERON:0003528!8.27e-07!34;UBERON:0001893!8.53e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.52e-50;2!UBERON:0002346;5.56e-26;4!UBERON:0000923;5.56e-26;4!UBERON:0010316;5.56e-26;4!UBERON:0005291;5.56e-26;4!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0002050;4.21e-21;5!UBERON:0005423;4.21e-21;5!UBERON:0001894;1.91e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85052257795705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85052257795705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@NKX2-2 | |short_description=p11@NKX2-2 | ||
}} | }} |
Latest revision as of 18:05, 24 September 2015
Short description: | p11@NKX2-2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NKX2-2_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 232bp_to_ENST00000377142, NM_002509, uc002wsi.2_5end |
EntrezGene: | NKX2-2 |
HGNC: | 7835 |
UniProt: | O95096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.73e-11 | 10 |