FFCP PHASE1:Hg19::chr17:41476352..41476368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=379 | |EntrezGene=379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=656 | |HGNC=656 | ||
|TSSclassifier=strong | |||
|UniProt=P49703 | |UniProt=P49703 | ||
|association_with_transcript=0bp_to_ENST00000320033,NM_001661,uc002idt.2_5end | |association_with_transcript=0bp_to_ENST00000320033,NM_001661,uc002idt.2_5end | ||
|cluster_id=chr17:41476352..41476368,+ | |||
|description=CAGE_peak_1_at_ARL4D_5end | |description=CAGE_peak_1_at_ARL4D_5end | ||
|id=chr17:41476352..41476368,+ | |id=chr17:41476352..41476368,+ | ||
|ontology_enrichment_celltype=CL:0000057!6.67e-13!75;CL:0000055!1.55e-12!180;CL:0000220!8.48e-08!246;CL:0000066!8.95e-08!254;CL:0002321!9.18e-08!248;CL:0000221!1.20e-07!71;CL:0002076!3.69e-07!43 | |ontology_enrichment_celltype=CL:0000057!6.67e-13!75;CL:0000055!1.55e-12!180;CL:0000220!8.48e-08!246;CL:0000066!8.95e-08!254;CL:0002321!9.18e-08!248;CL:0000221!1.20e-07!71;CL:0002076!3.69e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.08e-13,76;CL:0000221,8.81e-08,72;CL:0000066,9.14e-08,253;CL:0002321,1.38e-07,250;CL:0002076,5.63e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.19e-17!365;UBERON:0003102!6.24e-14!95;UBERON:0000481!8.55e-14!347;UBERON:0001048!6.09e-13!168;UBERON:0000468!2.63e-11!659;UBERON:0004119!3.61e-11!169;UBERON:0000925!3.61e-11!169;UBERON:0006595!3.61e-11!169;UBERON:0000062!1.12e-10!511;UBERON:0001444!1.39e-10!48;UBERON:0000467!1.13e-09!625;UBERON:0000480!1.77e-09!626;UBERON:0001007!1.78e-08!155;UBERON:0001555!1.78e-08!155;UBERON:0007026!1.78e-08!155;UBERON:0005085!7.47e-08!29;UBERON:0003104!8.88e-08!238;UBERON:0009142!8.88e-08!238;UBERON:0000922!9.18e-08!612;UBERON:0001004!2.71e-07!72;UBERON:0002100!2.93e-07!216;UBERON:0002050!3.10e-07!605;UBERON:0005423!3.10e-07!605;UBERON:0000923!5.16e-07!604;UBERON:0005291!5.16e-07!604;UBERON:0006598!5.16e-07!604;UBERON:0002532!5.16e-07!604;UBERON:0000064!6.45e-07!219;UBERON:0002097!8.11e-07!40 | |ontology_enrichment_uberon=UBERON:0000475!9.19e-17!365;UBERON:0003102!6.24e-14!95;UBERON:0000481!8.55e-14!347;UBERON:0001048!6.09e-13!168;UBERON:0000468!2.63e-11!659;UBERON:0004119!3.61e-11!169;UBERON:0000925!3.61e-11!169;UBERON:0006595!3.61e-11!169;UBERON:0000062!1.12e-10!511;UBERON:0001444!1.39e-10!48;UBERON:0000467!1.13e-09!625;UBERON:0000480!1.77e-09!626;UBERON:0001007!1.78e-08!155;UBERON:0001555!1.78e-08!155;UBERON:0007026!1.78e-08!155;UBERON:0005085!7.47e-08!29;UBERON:0003104!8.88e-08!238;UBERON:0009142!8.88e-08!238;UBERON:0000922!9.18e-08!612;UBERON:0001004!2.71e-07!72;UBERON:0002100!2.93e-07!216;UBERON:0002050!3.10e-07!605;UBERON:0005423!3.10e-07!605;UBERON:0000923!5.16e-07!604;UBERON:0005291!5.16e-07!604;UBERON:0006598!5.16e-07!604;UBERON:0002532!5.16e-07!604;UBERON:0000064!6.45e-07!219;UBERON:0002097!8.11e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0001444;6.52e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.48e-15,99;UBERON:0001048,7.73e-14,160;UBERON:0004119,2.66e-12,160;UBERON:0000925,2.66e-12,160;UBERON:0006595,2.66e-12,160;UBERON:0001444,5.24e-10,49;UBERON:0000033,9.24e-10,56;UBERON:0001007,2.31e-09,145;UBERON:0001555,2.31e-09,145;UBERON:0007026,2.31e-09,145;UBERON:0000153,2.46e-08,62;UBERON:0007811,2.46e-08,62;UBERON:0001004,9.21e-08,74;UBERON:0005085,1.66e-07,31;UBERON:0002097,5.01e-07,41;UBERON:0000165,6.43e-07,29;UBERON:0000930,6.43e-07,29;UBERON:0002199,7.58e-07,46;UBERON:0002416,7.58e-07,46 | |||
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| ||
|short_description=p1@ARL4D | |short_description=p1@ARL4D | ||
}} | }} |
Latest revision as of 18:16, 24 September 2015
Short description: | p1@ARL4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARL4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320033, NM_001661, uc002idt.2_5end |
EntrezGene: | ARL4D |
HGNC: | 656 |
UniProt: | P49703 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.08e-13 | 76 |
ectodermal cell | 8.81e-08 | 72 |
epithelial cell | 9.14e-08 | 253 |
embryonic cell | 1.38e-07 | 250 |
endo-epithelial cell | 5.63e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.48e-15 | 99 |
primordium | 7.73e-14 | 160 |
endoderm-derived structure | 2.66e-12 | 160 |
endoderm | 2.66e-12 | 160 |
presumptive endoderm | 2.66e-12 | 160 |
subdivision of head | 5.24e-10 | 49 |
head | 9.24e-10 | 56 |
digestive system | 2.31e-09 | 145 |
digestive tract | 2.31e-09 | 145 |
primitive gut | 2.31e-09 | 145 |
anterior region of body | 2.46e-08 | 62 |
craniocervical region | 2.46e-08 | 62 |
respiratory system | 9.21e-08 | 74 |
ectodermal placode | 1.66e-07 | 31 |
skin of body | 5.01e-07 | 41 |
mouth | 6.43e-07 | 29 |
stomodeum | 6.43e-07 | 29 |
integument | 7.58e-07 | 46 |
integumental system | 7.58e-07 | 46 |