FFCP PHASE1:Hg19::chr4:11430929..11430940,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5194 | |||
|TSSclassifier=strong | |||
|UniProt=O14792 | |||
|association_with_transcript=-392bp_to_NM_005114,uc003gmq.2_5end | |||
|cluster_id=chr4:11430929..11430940,- | |||
|description=CAGE_peak_9_at_HS3ST1_5end | |||
|id=chr4:11430929..11430940,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;5.93e-09;2!CL:0002202;1.02e-07;9!CL:0002632;1.02e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,8.09e-09,2;CL:0002202,1.29e-07,9;CL:0002632,1.29e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.41e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;5.10e-17;1!DOID:3603;5.10e-17;1!DOID:1749;2.03e-10;14!DOID:4929;3.57e-09;2!DOID:3910;5.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,5.53e-17,1;DOID:3603,5.53e-17,1;DOID:1749,2.54e-10,14;DOID:4929,3.43e-09,2;DOID:3910,8.74e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.13e-09;7!UBERON:0001173;1.13e-09;7!UBERON:0004903;5.93e-09;2!UBERON:0006955;5.93e-09;2!UBERON:0004801;5.93e-09;2!UBERON:0002173;5.93e-09;2!UBERON:0002186;5.93e-09;2!UBERON:0000058;4.95e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,8.09e-09,2;UBERON:0004801,8.09e-09,2;UBERON:0004903,8.74e-09,2;UBERON:0002173,8.74e-09,2;UBERON:0002186,8.74e-09,2;UBERON:0002294,8.03e-08,9;UBERON:0001173,8.03e-08,9;UBERON:0004912,8.03e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0.818718450173537,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,1.1384259382189,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0.649094787309367,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0,0.383382679165211,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0.764628819135115,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52776196950456,0.179021174675609,0,0,0,0,0,0,0,0,0,1.44999915086959,0,1.01701460117107,0,0,0,0,0,0,0,0.552896299656123,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,1.04471047896483,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,1.70762395791482,0,0.288180834308212,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.788057072991982,0.0524545881349981,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,1.27592034051333,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0,0,0.335566295393377,0.294450700845729,0.121917924982269,0,0,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0,0,1.07132363163395,0.705789743431384,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.860666464712116,0.332660356546013,0.407016343054873,0,0,2.96423166951737,0,0,0,0,0,0 | |||
|short_description=p9@HS3ST1 | |||
}} |
Latest revision as of 19:15, 24 September 2015
Short description: | p9@HS3ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HS3ST1_5end |
Coexpression cluster: | NA |
Association with transcript: | -392bp_to_NM_005114, uc003gmq.2_5end |
EntrezGene: | HS3ST1 |
HGNC: | 5194 |
UniProt: | O14792 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 8.09e-09 | 2 |
epithelial cell of tracheobronchial tree | 1.29e-07 | 9 |
epithelial cell of lower respiratory tract | 1.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 8.09e-09 | 2 |
cervix epithelium | 8.09e-09 | 2 |
bronchoalveolar duct junction | 8.74e-09 | 2 |
alveolar duct | 8.74e-09 | 2 |
bronchiole | 8.74e-09 | 2 |
biliary system | 8.03e-08 | 9 |
biliary tree | 8.03e-08 | 9 |
biliary bud | 8.03e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 5.53e-17 | 1 |
mucinous cystadenocarcinoma | 5.53e-17 | 1 |
squamous cell carcinoma | 2.54e-10 | 14 |
tubular adenocarcinoma | 3.43e-09 | 2 |
lung adenocarcinoma | 8.74e-09 | 2 |