FFCP PHASE1:Hg19::chr9:123342403..123342414,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55755 | |EntrezGene=55755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18672 | |HGNC=18672 | ||
|TSSclassifier=strong | |||
|UniProt=Q96SN8 | |UniProt=Q96SN8 | ||
|association_with_transcript=21bp_to_ENST00000349780,ENST00000360190_5end | |association_with_transcript=21bp_to_ENST00000349780,ENST00000360190_5end | ||
|cluster_id=chr9:123342403..123342414,- | |||
|description=CAGE_peak_4_at_CDK5RAP2_5end | |description=CAGE_peak_4_at_CDK5RAP2_5end | ||
|id=chr9:123342403..123342414,- | |id=chr9:123342403..123342414,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.37e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.33e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.27e-09;11!UBERON:0009497;7.09e-08;13 | |||
|ontology_enrichment_disease=DOID:162!1.74e-10!235;DOID:14566!1.23e-09!239;DOID:0050687!3.37e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.15e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.05e-10;19!UBERON:0006925;6.05e-10;19!UBERON:0002423;2.57e-07;25!UBERON:0002365;2.59e-07;31!UBERON:0002330;2.59e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.24e-10,19;UBERON:0006925,4.24e-10,19;UBERON:0008836,4.24e-10,19;UBERON:0007499,1.73e-09,25;UBERON:0009856,4.52e-09,26;UBERON:0008835,1.40e-08,22;UBERON:0003894,1.40e-08,22;UBERON:0009854,3.65e-08,23;UBERON:0002365,1.54e-07,31;UBERON:0002330,1.54e-07,31;UBERON:0009497,1.98e-07,25;UBERON:0000015,1.98e-07,25;UBERON:0002423,1.98e-07,25;UBERON:0006235,1.98e-07,25;UBERON:0004161,1.98e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0.495065411840187,0,0,0,0,0.487932798790507,0,0.204000691244253,0.626909442956176,1.14494394852423,0.958120975510189,1.12988375635323,0.382067028739756,0.410502947249729,0.236132343941038,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0,1.39440961044543,0.284338464974843,0,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0.68725489096526,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0.821127996921047,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.661743720148475,0.443458794925128,0.527008714158756,0.458426764241994,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0.535798369704479,0.22452937262617,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.490385709340376,0,0.576175924479999,0,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.421352420106746,0.61246251376468,0.491337269247072,0,0,0.494533858557114,0,0,0.505008341862199,0.375355559615893,0.277064115484183,0,0,0.751190294532984,0.340296549480063,0.89694817844431,0,0.211931901159562,0.600182192168805,0,0,0.37223371266318,1.0126579934476,0.584622030967192,0.504867548488229,0.368199594569197,0,0,0.10075209822764,0,0.193260853163297,0.545492241181669,0,1.21973706129595,0.397589304964456,1.16193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0.474541238222193,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,2.53510069643662,1.96565443335525,0,0.882926198829301,0.368965315629341,0.343135620597051,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0.34779121492523,0.234817388471643,0.433099343283221,0,0.380508304469197,0,0,0,0,0.148631162288728,0.93733833986777,0,0.141775097242386,0.53735113621709,0.581267877027924,0,1.47798971368783,0.44024217006613,0.207328115540772,0.144119953416961,0.25248486685276,0.761974731506028,1.52795370223311,0,0,0.102827492703324,0.901029173531752,0.857479297891735,0.112131084345361,0,0.66004457238855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.821905290201534,0.895304816199478,0.336255431980582,0.197030760201927,0.431255149719035,0.77005821767849,0.508189248444927,0,0,0.335032530668698,1.27587750330633,1.49801404789436,0,0,0.49076596687656,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.117141414992713,0,0,0,0,0.553107505625109,0.260650843404249,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0.303127571446259,1.66435439510497,0.604780586659361,0,0.460385919864187,0,0,0,0.160853921143607,0,0.308419387605311,0.355123450626254,0.246381468041427,0.519254429183621,0,0,0.200506470303285,0.184161977871793,0.574072240823034,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0.657779629937804,1.3071772551245,0.256450125116389,0,0,0.309123034943167,1.64825036673018,1.56768049849117,0,0,0,0.193341436584244,0.462145851343933,0.15350367472613,0.413509717453592,0.214840489736547,0.290033387828457,0.596586391912706,0.534192213880424,0,0.384380134730212,1.02090169995667,0,0,0,0,0,0,0,0.18532421910392,0,0,0.632758849437452,0.38126038784765,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.589062011728432,0,0,0,0,0.243713489631284,0,0.409499734223957,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0.143411352204052,0,0,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0.192444225451024,0,0,0.376575203107117,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0.714695326373367,0,0,0,0.79312517629427,0.427296284509893,0,0.980160863924127,0.743212700502875,1.00988449083511,0.569134746787313,0.797131363644112,0.997896857164083,0,0,0,0.280797178113459,0.456469358066384,0.156679895773023,0,0.338583555603207,1.4452926759333,0.201799707191048,0.425846237690326,0.687010689511529,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,1.39203086947621,1.23087398947712,0,0.99921590399346,0,0.18714054040822,0.146508179271894,0.36408156524854,0.891547074219827,0.284136146806413,0,0.296964680832639,0.614321404198464,0,0.703347082052564,0.111308705022906,0.329607748453519,0.422250816255987,0.19924798825107,0.276283915531148,0,0.306806047506464,0.123084805461069,0,0.8088151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| ||
|short_description=p4@CDK5RAP2 | |short_description=p4@CDK5RAP2 | ||
}} | }} |
Latest revision as of 19:31, 24 September 2015
Short description: | p4@CDK5RAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDK5RAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000349780, ENST00000360190_5end |
EntrezGene: | CDK5RAP2 |
HGNC: | 18672 |
UniProt: | Q96SN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.33e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.24e-10 | 19 |
digestive gland | 4.24e-10 | 19 |
liver bud | 4.24e-10 | 19 |
epithelial sac | 1.73e-09 | 25 |
sac | 4.52e-09 | 26 |
hepatic diverticulum | 1.40e-08 | 22 |
liver primordium | 1.40e-08 | 22 |
digestive tract diverticulum | 3.65e-08 | 23 |
exocrine gland | 1.54e-07 | 31 |
exocrine system | 1.54e-07 | 31 |
epithelium of foregut-midgut junction | 1.98e-07 | 25 |
anatomical boundary | 1.98e-07 | 25 |
hepatobiliary system | 1.98e-07 | 25 |
foregut-midgut junction | 1.98e-07 | 25 |
septum transversum | 1.98e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.15e-09 | 2 |