FFCP PHASE1:Hg19::chr2:220116811..220116826,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7277 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12407 | |||
|TSSclassifier=strong | |||
|UniProt=P68366 | |||
|association_with_transcript=126bp_to_AB590384,BT006731,CU679265,DQ893824_5end | |||
|cluster_id=chr2:220116811..220116826,- | |||
|coexpression_cluster_id=C4188 | |||
|description=CAGE_peak_4_at_TUBA4A_5end | |||
|id=chr2:220116811..220116826,- | |||
|ontology_enrichment_celltype=CL:0000838!1.10e-07!52;CL:0000542!3.11e-07!53;CL:0000051!3.11e-07!53;CL:0000791!9.47e-07!18;CL:0000789!9.47e-07!18;CL:0002420!9.47e-07!18;CL:0002419!9.47e-07!18;CL:0000790!9.47e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.27e-08;18!CL:0000789;1.27e-08;18!CL:0002419;1.27e-08;18!CL:0000625;3.31e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.89e-09,18;CL:0000789,9.89e-09,18;CL:0002420,9.89e-09,18;CL:0002419,9.89e-09,18;CL:0000790,9.89e-09,18;CL:0000625,3.42e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.27e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.99e-15!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.07e-11;9!UBERON:0001557;9.07e-11;9!UBERON:0001950;2.98e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.43e-11,9;UBERON:0007023,2.12e-10,114;UBERON:0001557,1.09e-07,19;UBERON:0001950,4.13e-07,20 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.783556884599516,0.737201809504527,16.0494268633658,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.502170558379211,2.67446920117829,2.29881650459848,3.06972047123349,0,1.53531759238885,0.464448369948228,14.7107395916628,15.9639136952473,5.17655614233503,0.46480320348181,0.568676929949686,0,0,0.401088894940283,0.868043482863407,0,0,0,1.01778767145695,1.13362783106643,0.242584061187816,0.232429036905685,0,0.309706370895104,0.575384784644301,0.768482119587302,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,1.27867425159808,0,0.398927315243264,0,0.580418477257168,0,1.24564449799115,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0.949387162322653,0,0.637812899895131,0,0.673971786878971,0.600707571366025,0.16072558669708,0.855038231223746,0.59675003159727,0.365328307529268,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,1.72425731986345,2.64417949113945,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0.196709770113833,1.57204305099666,1.23360899399706,1.17030546773475,0.977766799900771,0.946895611469467,0,1.89397776704795,1.47302953737419,0.221533894583621,0.541607727530031,2.30564375506215,2.21100890851793,1.97325485524411,3.03985019564433,0.579606171470105,0.889719378972363,0.802622484269139,0,2.15287751125376,1.91610246800961,0.34362744548263,0.506039384039006,1.27426165729639,1.95325036156926,1.90090408889675,1.50575119077773,1.15187950038977,1.24930726552346,1.4206635122641,1.64225599384209,0.80642697289893,5.08136371988664,1.01377082717959,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0.221729397462564,0.087834785693126,1.30979075497713,0,2.22470665670658,0.324547393654683,0.348259474598534,0.797747763113191,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0,1.25396979922086,0.258416759169329,0,0,0,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0.898117490504679,0.450445921933289,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.421352420106746,0,0.491337269247072,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,0,0,0,0.232387885739037,0.725627385107593,0,0.36497735907583,0,0.643240938192885,0,0,0,5.20549920175313,3.03452442140583,3.13314338848527,6.39705041847885,2.83243277320128,1.66089433377768,1.21348177344148,2.15843611637881,1.53898862778556,1.4763109092493,0,0,0,0,1.96565443335525,2.36315962672562,0.441463099414651,0.122988438543114,0.171567810298526,2.30475599358114,1.1240175325762,5.32803553781643,1.38882667737794,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0.93733833986777,1.84780341018745,1.70130116690864,0.268675568108545,0.581267877027924,3.83382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,2.61460037580088,0.599837947092342,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0.112085143993527,0,1.94064817373566,0.513372145118994,0,0,0,0.167516265334349,0,0.749007023947182,8.97484377612075,1.24324654030811,0.24538298343828,0,0.271265023699736,0,0.892144943985809,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,2.15714200818617,0.74709290462411,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0.232420756919918,0.362578348774867,5.41367469818869,1.47329582297434,0,0.364182336013434,0.393373244878272,0.451199612907412,2.15642943892361,1.56869953835371,1.46139224653261,1.37217117560738,1.13733384070897,0,1.94324324491925,0,0.270946437543853,0.501689773854853,0,0,1.34324852833307,1.53481913652154,1.5686127061494,0.256450125116389,0,0,0.206082023295445,1.83138929636687,0.41254749960294,2.87132768998086,5.85054221432869,0,0,0.462145851343933,0.614014698904518,0,0,0.435050081742686,0.255679882248303,0,2.14870389969272,3.45942121257191,0.382838137483752,0.50578890427775,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0.842516912477962,0.48763373908959,0.974853958525138,1.05650146756755,0.136499911407986,0,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0.7133421029625,0.354761064070598,0.633322905892992,0.329294892959902,0,0,2.11688647996127,10.0545341330368,13.0669181833587,0.188287601553558,3.01353760869861,8.42357378338128,7.09488245658681,2.29723400206959,0.507447609232169,2.29391162142713,5.12682468456746,0.714695326373367,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| |||
|short_description=p4@TUBA4A | |||
}} |
Latest revision as of 20:00, 24 September 2015
Short description: | p4@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TUBA4A_5end |
Coexpression cluster: | C4188_Neutrophils_Bronchial_Alveolar_medial_Prostate_Sebocyte_Urothelial |
Association with transcript: | 126bp_to_AB590384, BT006731, CU679265, DQ893824_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | P68366 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.89e-09 | 18 |
alpha-beta T cell | 9.89e-09 | 18 |
immature T cell | 9.89e-09 | 18 |
mature T cell | 9.89e-09 | 18 |
immature alpha-beta T cell | 9.89e-09 | 18 |
CD8-positive, alpha-beta T cell | 3.42e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.43e-11 | 9 |
adult organism | 2.12e-10 | 114 |
upper respiratory tract | 1.09e-07 | 19 |
neocortex | 4.13e-07 | 20 |