FFCP PHASE1:Hg19::chr2:220118631..220118647,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:220118631..220118647,- to FFCP PHASE1:Hg19::chr2:220118631..220118647,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7277 | |EntrezGene=7277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12407 | |HGNC=12407 | ||
|TSSclassifier=strong | |||
|UniProt=P68366 | |UniProt=P68366 | ||
|association_with_transcript=0bp_to_ENST00000462806,ENST00000475683,NM_006000,uc002vkt.1_5end | |||
|cluster_id=chr2:220118631..220118647,- | |||
|description=CAGE_peak_1_at_TUBA4A_5end | |||
|id=chr2:220118631..220118647,- | |||
|ontology_enrichment_celltype=CL:0000542!6.59e-14!53;CL:0000051!6.59e-14!53;CL:0000838!1.94e-13!52;CL:0002087!3.78e-13!119;CL:0000738!1.89e-11!140;CL:0002032!3.50e-11!165;CL:0000837!3.50e-11!165;CL:0000037!4.93e-11!172;CL:0000566!4.93e-11!172;CL:0000988!4.10e-10!182;CL:0002031!4.93e-10!124;CL:0000791!8.92e-08!18;CL:0000789!8.92e-08!18;CL:0002420!8.92e-08!18;CL:0002419!8.92e-08!18;CL:0000790!8.92e-08!18;CL:0000945!7.58e-07!24;CL:0000826!7.58e-07!24;CL:0002159!8.01e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.86e-08;53!CL:0000791;8.88e-08;18!CL:0000789;8.88e-08;18!CL:0002419;8.88e-08;18!CL:0000945;7.49e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.50e-14,53;CL:0000051,6.50e-14,53;CL:0000838,1.91e-13,52;CL:0002087,4.90e-13,115;CL:0000738,2.67e-11,136;CL:0002032,5.30e-11,161;CL:0000837,5.30e-11,161;CL:0000037,7.54e-11,168;CL:0000988,4.00e-10,177;CL:0002031,6.85e-10,120;CL:0000791,8.91e-08,18;CL:0000789,8.91e-08,18;CL:0002420,8.91e-08,18;CL:0002419,8.91e-08,18;CL:0000790,8.91e-08,18;CL:0000945,7.57e-07,24;CL:0000826,7.57e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;2.86e-08;53!CL:0000790;8.88e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.80e-18!115;UBERON:0001004!7.25e-07!72;UBERON:0000065!8.61e-07!53 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-17,114 | |||
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| ||
|short_description=p1@TUBA4A | |||
}} | }} |
Latest revision as of 20:02, 24 September 2015
Short description: | p1@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUBA4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000462806, ENST00000475683, NM_006000, uc002vkt.1_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | P68366 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.50e-14 | 53 |
common lymphoid progenitor | 6.50e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.91e-13 | 52 |
nongranular leukocyte | 4.90e-13 | 115 |
leukocyte | 2.67e-11 | 136 |
hematopoietic oligopotent progenitor cell | 5.30e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.30e-11 | 161 |
hematopoietic stem cell | 7.54e-11 | 168 |
hematopoietic cell | 4.00e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 6.85e-10 | 120 |
mature alpha-beta T cell | 8.91e-08 | 18 |
alpha-beta T cell | 8.91e-08 | 18 |
immature T cell | 8.91e-08 | 18 |
mature T cell | 8.91e-08 | 18 |
immature alpha-beta T cell | 8.91e-08 | 18 |
lymphocyte of B lineage | 7.57e-07 | 24 |
pro-B cell | 7.57e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.02e-17 | 114 |