FFCP PHASE1:Hg19::chr2:220142900..220142916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7277 | |EntrezGene=7277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12407 | |HGNC=12407 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQ00 | |UniProt=C9JQ00 | ||
|association_with_transcript=-8bp_to_ENST00000427737_5end | |association_with_transcript=-8bp_to_ENST00000427737_5end | ||
|cluster_id=chr2:220142900..220142916,- | |||
|coexpression_cluster_id=C577 | |coexpression_cluster_id=C577 | ||
|description=CAGE_peak_22_at_TUBA4A_5end | |description=CAGE_peak_22_at_TUBA4A_5end | ||
|id=chr2:220142900..220142916,- | |id=chr2:220142900..220142916,- | ||
|ontology_enrichment_celltype=CL:0000945!3.83e-67!24;CL:0000826!3.83e-67!24;CL:0000236!1.74e-40!14;CL:0000542!6.25e-40!53;CL:0000051!6.25e-40!53;CL:0000838!1.69e-36!52;CL:0002087!7.94e-21!119;CL:0000738!1.02e-18!140;CL:0002031!4.70e-16!124;CL:0000037!2.53e-14!172;CL:0000566!2.53e-14!172;CL:0002032!1.08e-13!165;CL:0000837!1.08e-13!165;CL:0000988!2.89e-13!182;CL:0000785!6.32e-13!2;CL:0000955!6.32e-13!2;CL:0000818!6.32e-13!2;CL:0000954!6.32e-13!2;CL:0000816!6.32e-13!2;CL:0000817!6.66e-09!3;CL:0000819!1.98e-07!1;CL:0000946!3.60e-07!1;CL:0000786!3.60e-07!1;CL:0000980!3.60e-07!1;CL:0000810!5.14e-07!1;CL:0000895!5.14e-07!1;CL:0002436!5.14e-07!1;CL:0002427!5.14e-07!1;CL:0002428!5.14e-07!1;CL:0002429!5.14e-07!1;CL:0002433!5.14e-07!1;CL:0002431!5.14e-07!1;CL:0002432!5.14e-07!1 | |ontology_enrichment_celltype=CL:0000945!3.83e-67!24;CL:0000826!3.83e-67!24;CL:0000236!1.74e-40!14;CL:0000542!6.25e-40!53;CL:0000051!6.25e-40!53;CL:0000838!1.69e-36!52;CL:0002087!7.94e-21!119;CL:0000738!1.02e-18!140;CL:0002031!4.70e-16!124;CL:0000037!2.53e-14!172;CL:0000566!2.53e-14!172;CL:0002032!1.08e-13!165;CL:0000837!1.08e-13!165;CL:0000988!2.89e-13!182;CL:0000785!6.32e-13!2;CL:0000955!6.32e-13!2;CL:0000818!6.32e-13!2;CL:0000954!6.32e-13!2;CL:0000816!6.32e-13!2;CL:0000817!6.66e-09!3;CL:0000819!1.98e-07!1;CL:0000946!3.60e-07!1;CL:0000786!3.60e-07!1;CL:0000980!3.60e-07!1;CL:0000810!5.14e-07!1;CL:0000895!5.14e-07!1;CL:0002436!5.14e-07!1;CL:0002427!5.14e-07!1;CL:0002428!5.14e-07!1;CL:0002429!5.14e-07!1;CL:0002433!5.14e-07!1;CL:0002431!5.14e-07!1;CL:0002432!5.14e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.40e-60;24!CL:0000236;5.01e-49;13!CL:0000542;2.25e-26;53!CL:0000785;1.71e-19;1!CL:0000819;1.71e-19;1!CL:0002087;1.43e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.41e-60,24;CL:0000826,8.41e-60,24;CL:0000236,1.74e-45,14;CL:0000542,2.81e-33,53;CL:0000051,2.81e-33,53;CL:0000838,1.98e-27,52;CL:0000819,2.25e-19,1;CL:0002087,6.45e-15,115;CL:0000738,1.57e-12,136;CL:0002031,1.71e-11,120;CL:0002032,1.72e-10,161;CL:0000837,1.72e-10,161;CL:0000785,2.27e-10,2;CL:0000955,2.27e-10,2;CL:0000818,2.27e-10,2;CL:0000954,2.27e-10,2;CL:0000816,2.27e-10,2;CL:0000037,5.01e-10,168;CL:0000988,1.75e-09,177;CL:0000817,2.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.25e-26;53!CL:0000954;1.97e-10;2 | |||
|ontology_enrichment_disease=DOID:0060058!4.10e-21!10;DOID:12603!1.75e-07!1;DOID:0060073!1.98e-07!1;DOID:8675!1.98e-07!1;DOID:630!5.78e-07!1;DOID:0050177!5.78e-07!1;DOID:0050427!5.78e-07!1;DOID:0060060!7.73e-07!1;DOID:0060061!7.73e-07!1;DOID:8691!7.73e-07!1 | |ontology_enrichment_disease=DOID:0060058!4.10e-21!10;DOID:12603!1.75e-07!1;DOID:0060073!1.98e-07!1;DOID:8675!1.98e-07!1;DOID:630!5.78e-07!1;DOID:0050177!5.78e-07!1;DOID:0050427!5.78e-07!1;DOID:0060060!7.73e-07!1;DOID:0060061!7.73e-07!1;DOID:8691!7.73e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.64e-29;10!DOID:0060073;1.71e-19;1!DOID:8675;1.71e-19;1!DOID:12603;1.71e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.64e-29,10;DOID:12603,1.56e-19,1;DOID:0060073,2.25e-19,1;DOID:8675,2.25e-19,1;DOID:2531,4.84e-09,51;DOID:0060083,4.84e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.50e-08!3;UBERON:0004854!1.50e-08!3;UBERON:0009034!1.50e-08!3;UBERON:0002095!1.50e-08!3;UBERON:0004782!1.50e-08!3;UBERON:0003281!1.50e-08!3;UBERON:0009664!1.50e-08!3;UBERON:0002296!1.50e-08!3;UBERON:0005602!1.50e-08!3;UBERON:0001179!1.50e-08!3;UBERON:0006293!1.50e-08!3;UBERON:0004177!7.16e-08!7;UBERON:0002372!3.20e-07!1;UBERON:0001961!3.20e-07!1;UBERON:0001744!3.20e-07!1;UBERON:0001735!3.20e-07!1;UBERON:0001154!3.82e-07!1;UBERON:0001153!3.82e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!1.50e-08!3;UBERON:0004854!1.50e-08!3;UBERON:0009034!1.50e-08!3;UBERON:0002095!1.50e-08!3;UBERON:0004782!1.50e-08!3;UBERON:0003281!1.50e-08!3;UBERON:0009664!1.50e-08!3;UBERON:0002296!1.50e-08!3;UBERON:0005602!1.50e-08!3;UBERON:0001179!1.50e-08!3;UBERON:0006293!1.50e-08!3;UBERON:0004177!7.16e-08!7;UBERON:0002372!3.20e-07!1;UBERON:0001961!3.20e-07!1;UBERON:0001744!3.20e-07!1;UBERON:0001735!3.20e-07!1;UBERON:0001154!3.82e-07!1;UBERON:0001153!3.82e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p22@TUBA4A | |short_description=p22@TUBA4A | ||
}} | }} |
Latest revision as of 20:09, 24 September 2015
Short description: | p22@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_TUBA4A_5end |
Coexpression cluster: | C577_lymphoma_Burkitt_diffuse_b_myeloma_plasma_appendix |
Association with transcript: | -8bp_to_ENST00000427737_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | C9JQ00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.41e-60 | 24 |
pro-B cell | 8.41e-60 | 24 |
B cell | 1.74e-45 | 14 |
lymphocyte | 2.81e-33 | 53 |
common lymphoid progenitor | 2.81e-33 | 53 |
lymphoid lineage restricted progenitor cell | 1.98e-27 | 52 |
B-1 B cell | 2.25e-19 | 1 |
nongranular leukocyte | 6.45e-15 | 115 |
leukocyte | 1.57e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.71e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.72e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-10 | 161 |
mature B cell | 2.27e-10 | 2 |
pre-B-II cell | 2.27e-10 | 2 |
transitional stage B cell | 2.27e-10 | 2 |
small pre-B-II cell | 2.27e-10 | 2 |
immature B cell | 2.27e-10 | 2 |
hematopoietic stem cell | 5.01e-10 | 168 |
hematopoietic cell | 1.75e-09 | 177 |
precursor B cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.64e-29 | 10 |
acute leukemia | 1.56e-19 | 1 |
lymphatic system cancer | 2.25e-19 | 1 |
lymphosarcoma | 2.25e-19 | 1 |
hematologic cancer | 4.84e-09 | 51 |
immune system cancer | 4.84e-09 | 51 |