FFCP PHASE1:Hg19::chr17:42385312..42385320,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10900 | |EntrezGene=10900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16984 | |HGNC=16984 | ||
|TSSclassifier=strong | |||
|UniProt=Q59EK9 | |UniProt=Q59EK9 | ||
|association_with_transcript=-460bp_to_AL133657_5end | |association_with_transcript=-460bp_to_AL133657_5end | ||
|cluster_id=chr17:42385312..42385320,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_14_at_RUNDC3A_5end | |description=CAGE_peak_14_at_RUNDC3A_5end | ||
|id=chr17:42385312..42385320,+ | |id=chr17:42385312..42385320,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.22e-27;10!UBERON:0005564;2.22e-27;10!UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22 | |||
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|short_description=p14@RUNDC3A | |short_description=p14@RUNDC3A | ||
}} | }} |
Latest revision as of 20:42, 24 September 2015
Short description: | p14@RUNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RUNDC3A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -460bp_to_AL133657_5end |
EntrezGene: | RUNDC3A |
HGNC: | 16984 |
UniProt: | Q59EK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 7.68e-34 | 8 |
male reproductive organ | 5.49e-25 | 11 |
gonad | 1.09e-13 | 21 |
indifferent external genitalia | 1.09e-13 | 21 |
indifferent gonad | 1.09e-13 | 21 |
gonad primordium | 1.09e-13 | 21 |
external genitalia | 4.01e-13 | 22 |
male organism | 4.01e-13 | 22 |
male reproductive system | 4.01e-13 | 22 |
body cavity | 7.52e-07 | 46 |