FFCP PHASE1:Hg19::chr2:220325633..220325639,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |||
|TSSclassifier=strong | |||
|UniProt=Q15772 | |||
|association_with_transcript=85bp_to_uc002vlq.2_5end | |||
|cluster_id=chr2:220325633..220325639,+ | |||
|description=CAGE_peak_34_at_SPEG_5end | |||
|id=chr2:220325633..220325639,+ | |||
|ontology_enrichment_celltype=CL:0002602!2.40e-10!2;CL:0000174!1.80e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002592;5.96e-34;3!CL:0000062;2.19e-12;9!CL:0002494;1.54e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,5.96e-34,3;CL:0000062,2.16e-10,11;CL:0000375,2.16e-10,11;CL:0000335,2.16e-10,11;CL:0002494,1.54e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000335;2.16e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009568!2.40e-10!2;UBERON:0002216!2.40e-10!2;UBERON:0002209!2.40e-10!2;UBERON:0002213!2.40e-10!2;UBERON:0004267!2.40e-10!2;UBERON:0006444!2.40e-10!2;UBERON:0001995!2.40e-10!2;UBERON:0004715!2.40e-10!2;UBERON:0001468!2.40e-10!2;UBERON:0001130!2.40e-10!2;UBERON:0001066!2.40e-10!2;UBERON:0005174!5.95e-09!5;UBERON:0001137!5.95e-09!5;UBERON:0003978!1.39e-07!3;UBERON:0009751!1.39e-07!3;UBERON:0000946!1.39e-07!3;UBERON:0002523!1.39e-07!3;UBERON:0005983!1.39e-07!3;UBERON:0002165!1.39e-07!3;UBERON:0002062!1.39e-07!3;UBERON:0007280!1.39e-07!3;UBERON:0002418!3.60e-07!3;UBERON:0004755!3.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;5.96e-34;3!UBERON:0005985;5.96e-34;3!UBERON:0001621;5.96e-34;3!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,5.96e-34,3;UBERON:0003498,5.15e-21,5;UBERON:0005985,5.15e-21,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1060976908219,0.990113999047056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.627617077873999,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.857440047187092,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p34@SPEG | |||
}} |
Latest revision as of 21:31, 24 September 2015
Short description: | p34@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_SPEG_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_uc002vlq.2_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | Q15772 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 5.96e-34 | 3 |
osteoblast | 2.16e-10 | 11 |
osteoprogenitor cell | 2.16e-10 | 11 |
mesenchyme condensation cell | 2.16e-10 | 11 |
cardiocyte | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 5.96e-34 | 3 |
heart blood vessel | 5.15e-21 | 5 |
coronary vessel | 5.15e-21 | 5 |