FFCP PHASE1:Hg19::chr4:119947849..119947867,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:119947849..119947867,+
|short_description=p10@SYNPO2
|description=CAGE_peak_10_at_SYNPO2_5end
|association_with_transcript=32bp_to_BX647849_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=171024 | |EntrezGene=171024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17732 | |HGNC=17732 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_BX647849_5end | |||
|cluster_id=chr4:119947849..119947867,+ | |||
|description=CAGE_peak_10_at_SYNPO2_5end | |||
|id=chr4:119947849..119947867,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;4.88e-20;3!CL:0002579;4.34e-19;3!CL:0002617;4.87e-13;2!CL:0000136;6.39e-12;13!CL:0002334;2.42e-08;12!CL:0002174;2.34e-07;1!CL:0002581;2.34e-07;1!CL:0000501;2.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,5.08e-20,3;CL:0002579,1.90e-19,3;CL:0002617,3.60e-13,2;CL:0000136,2.46e-10,15;CL:0002334,1.76e-08,12;CL:0002174,1.51e-07,1;CL:0000501,1.51e-07,1;CL:0002581,1.95e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.99e-08;1!UBERON:0009143;2.34e-07;1!UBERON:0010115;2.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;2.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-23!115;UBERON:0003688!6.35e-11!6;UBERON:0002358!6.35e-11!6;UBERON:0003684!6.35e-11!6;UBERON:0001178!6.35e-11!6;UBERON:0000062!1.20e-07!511;UBERON:0004457!1.30e-07!12;UBERON:0000042!1.30e-07!12;UBERON:0000468!1.54e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.56e-37;6!UBERON:0002358;2.56e-37;6!UBERON:0003684;2.56e-37;6!UBERON:0001178;2.56e-37;6!UBERON:0004457;1.00e-24;9!UBERON:0000042;1.00e-24;9!UBERON:0002323;3.92e-10;45!UBERON:0004458;2.40e-09;48!UBERON:0002363;2.34e-07;1!UBERON:0005795;2.34e-07;1!UBERON:0001301;2.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.16e-37,6;UBERON:0002358,1.16e-37,6;UBERON:0003684,1.16e-37,6;UBERON:0001178,1.16e-37,6;UBERON:0004457,1.38e-18,12;UBERON:0000042,1.38e-18,12;UBERON:0003886,7.14e-12,54;UBERON:0002323,7.95e-12,46;UBERON:0004458,5.41e-11,49;UBERON:0002553,2.82e-10,61;UBERON:0001301,3.40e-07,1;UBERON:0002363,3.84e-07,1;UBERON:0007645,3.84e-07,1;UBERON:0007647,3.84e-07,1;UBERON:0010115,3.84e-07,1;UBERON:0002417,6.13e-07,60;UBERON:0000916,6.13e-07,60;UBERON:0009569,8.95e-07,112 | |||
|phase1_expression=1.81678379270557,1.2846031433459,4.51054093107108,3.00219895059391,4.46961094427288,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709446689665756,1.72372840368309,1.29096936716765,1.35426486594342,0,0,0,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0.640672166455702,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,1.28869858099219,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,0.841980283299221,1.40953064181271,3.58195074346692,1.93024705372329,1.48418066444991,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.796991953004279,0.552567831062295,0,0.102268682502155,0,0.311039587661807,0,0,0,2.26879832964947,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.846452843541768,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,1.23840590304675,1.83309043480088,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0.789168805698781,1.20990716048664,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.84279131327997,0,0.677942222341597,0,0,0,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0.279282401272254,0.458320848023367,0,0.199679000498991,1.28767814440971,0.223171457441873,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0.919036730290385,0.327872630709804,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,1.5794168953344,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.941917114206168,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,7.59704770736228,0,0,0,0,0,0,0,0.150962843566674,0.308696632431779,0.874238242015829,0,7.10930133086326,0,0.392616934229891,0,0,0.339854229375634,0.187967835959707,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,1.5870805215462,0.371995018166751,0,0,0,0,0,0,0,0.0918948995348449,0,1.06090177505535,0.267964130156178,0,0,1.0661699095049,0,0,0.31037357147929,0,0,0,0.435433495793923,0,0,0.502055437748735,0,0,0,0,0,0,0.733448665097199,1.62758471326295,0.665756774185513,0.603821380773079,0 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| ||
|short_description=p10@SYNPO2 | |||
}} | }} |
Latest revision as of 21:41, 24 September 2015
Short description: | p10@SYNPO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SYNPO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_BX647849_5end |
EntrezGene: | SYNPO2 |
HGNC: | 17732 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 5.08e-20 | 3 |
omentum preadipocyte | 1.90e-19 | 3 |
adipocyte of breast | 3.60e-13 | 2 |
fat cell | 2.46e-10 | 15 |
preadipocyte | 1.76e-08 | 12 |
follicular cell of ovary | 1.51e-07 | 1 |
granulosa cell | 1.51e-07 | 1 |
perirenal preadipocyte | 1.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.16e-37 | 6 |
peritoneum | 1.16e-37 | 6 |
abdominal cavity | 1.16e-37 | 6 |
visceral peritoneum | 1.16e-37 | 6 |
cavity lining | 1.38e-18 | 12 |
serous membrane | 1.38e-18 | 12 |
body cavity precursor | 7.14e-12 | 54 |
body cavity | 7.95e-12 | 46 |
body cavity or lining | 5.41e-11 | 49 |
anatomical cavity | 2.82e-10 | 61 |
epididymis | 3.40e-07 | 1 |
dura mater | 3.84e-07 | 1 |
future meninx | 3.84e-07 | 1 |
ectomeninx | 3.84e-07 | 1 |
future dura mater | 3.84e-07 | 1 |
abdominal segment of trunk | 6.13e-07 | 60 |
abdomen | 6.13e-07 | 60 |
subdivision of trunk | 8.95e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 4.09e-07 | 1 |