FFCP PHASE1:Hg19::chr9:12693225..12693228,+: Difference between revisions
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|id=chr9:12693225..12693228,+
|short_description=p17@TYRP1
|description=CAGE_peak_17_at_TYRP1_5end
|association_with_transcript=-80bp_to_ENST00000459790_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000459790_5end | |||
|cluster_id=chr9:12693225..12693228,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_17_at_TYRP1_5end | |||
|id=chr9:12693225..12693228,+ | |||
|ontology_enrichment_celltype=CL:0000147!4.87e-81!14;CL:0000148!2.26e-69!10;CL:0000541!2.26e-69!10;CL:0000710!1.44e-34!20;CL:0000149!2.26e-32!4;CL:0000325!1.09e-28!39;CL:0000075!1.61e-25!27;CL:0002077!8.25e-21!33;CL:0002567!4.43e-20!3;CL:0002586!1.39e-19!3;CL:0000333!7.18e-16!41;CL:0002566!8.63e-16!1;CL:0000133!4.82e-11!59;CL:0000221!3.85e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.05e-88;10!CL:0000147;1.65e-63;14!CL:0000710;1.36e-44;20!CL:0002567;9.89e-34;3!CL:0000075;3.96e-33;27!CL:0002566;5.23e-26;1!CL:0002077;1.14e-24;34!CL:0000149;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.05e-88,10;CL:0000541,1.05e-88,10;CL:0000147,1.65e-63,14;CL:0000710,1.36e-44,20;CL:0002567,1.08e-33,3;CL:0000075,3.96e-33,27;CL:0002077,2.26e-26,34;CL:0002566,4.61e-26,1;CL:0000333,6.58e-21,41;CL:0000133,8.53e-15,59;CL:0000221,3.22e-12,72;CL:0000149,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.67e-09;3!CL:0000133;3.09e-08;59!CL:0000221;5.45e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!2.00e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.55e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!7.18e-26!5;UBERON:0005388!7.18e-26!5;UBERON:0001802!7.18e-26!5;UBERON:0001781!1.39e-19!3;UBERON:0001782!1.39e-19!3;UBERON:0005424!1.39e-19!3;UBERON:0000970!1.45e-11!20;UBERON:0002104!5.00e-11!21;UBERON:0000020!4.31e-10!23;UBERON:0001032!1.11e-09!24;UBERON:0004456!1.11e-09!24;UBERON:0000019!2.95e-07!19;UBERON:0000047!2.95e-07!19;UBERON:0004088!2.95e-07!19;UBERON:0003072!2.95e-07!19;UBERON:0003071!2.95e-07!19;UBERON:0004128!2.95e-07!19 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p17@TYRP1 | |||
}} | }} |
Latest revision as of 23:27, 24 September 2015
Short description: | p17@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -80bp_to_ENST00000459790_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.05e-88 | 10 |
melanoblast | 1.05e-88 | 10 |
pigment cell | 1.65e-63 | 14 |
neurecto-epithelial cell | 1.36e-44 | 20 |
light melanocyte | 1.08e-33 | 3 |
columnar/cuboidal epithelial cell | 3.96e-33 | 27 |
ecto-epithelial cell | 2.26e-26 | 34 |
dark melanocyte | 4.61e-26 | 1 |
migratory neural crest cell | 6.58e-21 | 41 |
neurectodermal cell | 8.53e-15 | 59 |
ectodermal cell | 3.22e-12 | 72 |
visual pigment cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.55e-13 | 2 |