FFCP PHASE1:Hg19::chr20:2781222..2781302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56265 | |EntrezGene=56265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15771 | |HGNC=15771 | ||
|TSSclassifier=strong | |||
|UniProt=Q96SM3,Q8N2F1 | |UniProt=Q96SM3,Q8N2F1 | ||
|association_with_transcript=0bp_to_ENST00000380605,ENST00000421947,NM_001184699,NM_019609,uc002wgu.2,uc010gas.2_5end | |association_with_transcript=0bp_to_ENST00000380605,ENST00000421947,NM_001184699,NM_019609,uc002wgu.2,uc010gas.2_5end | ||
|cluster_id=chr20:2781222..2781302,- | |||
|description=CAGE_peak_1_at_CPXM1_5end | |description=CAGE_peak_1_at_CPXM1_5end | ||
|id=chr20:2781222..2781302,- | |id=chr20:2781222..2781302,- | ||
|ontology_enrichment_celltype=CL:1000449!2.28e-07!16 | |ontology_enrichment_celltype=CL:1000449!2.28e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;4.99e-08;15 | |ontology_enrichment_celltype_v019=CL:1000449;4.99e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.54e-08,15;CL:1000507,9.52e-07,10;CL:1000494,9.52e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.95e-09!94;UBERON:0001016!7.95e-09!94;UBERON:0000080!4.36e-08!18;UBERON:0002120!4.36e-08!18;UBERON:0004875!4.36e-08!18;UBERON:0005721!4.36e-08!18;UBERON:0005754!4.36e-08!18;UBERON:0007297!4.36e-08!18;UBERON:0006555!6.38e-08!17;UBERON:0005103!6.38e-08!17;UBERON:0000083!6.38e-08!17;UBERON:0009201!6.38e-08!17;UBERON:0004819!6.38e-08!17;UBERON:0006553!6.38e-08!17;UBERON:0003074!6.38e-08!17;UBERON:0003060!6.38e-08!17;UBERON:0004876!2.27e-07!20;UBERON:0003103!2.27e-07!69;UBERON:0004211!2.28e-07!16;UBERON:0001285!2.28e-07!16;UBERON:0007684!2.28e-07!16;UBERON:0003220!2.28e-07!16;UBERON:0004208!2.28e-07!16;UBERON:0005743!2.40e-07!86;UBERON:0003887!2.72e-07!21;UBERON:0002200!7.13e-07!11;UBERON:0006876!7.13e-07!11 | |ontology_enrichment_uberon=UBERON:0000073!7.95e-09!94;UBERON:0001016!7.95e-09!94;UBERON:0000080!4.36e-08!18;UBERON:0002120!4.36e-08!18;UBERON:0004875!4.36e-08!18;UBERON:0005721!4.36e-08!18;UBERON:0005754!4.36e-08!18;UBERON:0007297!4.36e-08!18;UBERON:0006555!6.38e-08!17;UBERON:0005103!6.38e-08!17;UBERON:0000083!6.38e-08!17;UBERON:0009201!6.38e-08!17;UBERON:0004819!6.38e-08!17;UBERON:0006553!6.38e-08!17;UBERON:0003074!6.38e-08!17;UBERON:0003060!6.38e-08!17;UBERON:0004876!2.27e-07!20;UBERON:0003103!2.27e-07!69;UBERON:0004211!2.28e-07!16;UBERON:0001285!2.28e-07!16;UBERON:0007684!2.28e-07!16;UBERON:0003220!2.28e-07!16;UBERON:0004208!2.28e-07!16;UBERON:0005743!2.40e-07!86;UBERON:0003887!2.72e-07!21;UBERON:0002200!7.13e-07!11;UBERON:0006876!7.13e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.02e-11;49!UBERON:0006555;4.99e-08;15!UBERON:0004819;4.99e-08;15!UBERON:0001285;4.99e-08;15!UBERON:0007684;4.99e-08;15!UBERON:0006876;3.97e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000922;5.02e-11;49!UBERON:0006555;4.99e-08;15!UBERON:0004819;4.99e-08;15!UBERON:0001285;4.99e-08;15!UBERON:0007684;4.99e-08;15!UBERON:0006876;3.97e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,1.02e-08,16;UBERON:0004819,1.02e-08,16;UBERON:0004211,4.54e-08,15;UBERON:0009773,4.54e-08,15;UBERON:0001231,4.54e-08,15;UBERON:0001285,4.54e-08,15;UBERON:0007684,4.54e-08,15;UBERON:0004208,4.54e-08,15;UBERON:0002113,2.17e-07,26;UBERON:0003918,2.17e-07,26;UBERON:0011143,2.17e-07,26;UBERON:0005095,2.17e-07,26;UBERON:0007687,2.17e-07,26;UBERON:0000489,2.59e-07,31;UBERON:0003103,3.45e-07,68;UBERON:0006876,4.00e-07,11;UBERON:0004810,9.52e-07,10 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,13.8978372153903,149.659364958507,4.17747692052565,1.39560233594486,0,0,10.0250745897638,9.27912652038164,0.672325146451775,0,2.92124036154949,0.975865597581014,104.776020423347,50.3881707373305,81.4982275843028,50.9500057093281,30.5229967912532,48.4594588835939,0.764134057479513,0.656804715599566,0.708397031823113,0,0,0.619264493264304,0,0,0,0,0,98.9433480558435,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,70.0508041468837,47.082719290449,59.2614190743923,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.780356085359269,0.986627427622057,1.93445012450094,0.869409257205157,0.14828656316206,0.267540828089713,0,0,0,0,0,0.637130828648193,0,0,0,0.127986611154418,0,0.473554504088034,0,0,0,0,153.598325777796,52.9853679165873,10.356867509326,0,0,0.289693037921647,0,0,79.9764553208014,56.0975375580287,71.8488546969771,12.770459861027,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0.275118041940067,0,0.258416759169329,0,0,1.61131726843659,0,6.10155143870424,0,0,6.96537880615822,7.85852804191594,11.0359250873656,3.06633274931766,0,1.83201743930407,0,0,0,0,0.25326102332916,0,0.286836620748814,1.41867352879343,7.28880880184999,0,0,42.635911849768,3.23305612967251,6.86539993076527,210.23546699881,289.240314088959,27.8842503882218,0,0.570471821544449,0.298897361103602,8.57271840099484,7.28428249656592,6.60118791500568,0,6.1417158655884,0.309977343527296,8.31602000097437,1.7308685049499,0.910161361938026,0,1.17835279767846,6.6312815532141,0,1.75591048352335,0.30648779579902,1.80285670687916,0.907457465280168,3.58779271377724,0.85422955527427,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0.506328996723799,0.389748020644795,1.51460264546469,0.460249493211497,3.07127507955743,0,0,2.03472710772585,0,0,0,36.8360592511378,57.5179194515246,61.6989836637143,85.7276924977113,52.7350578330063,55.1115812204503,0,10.2918550110862,0,0,0,0,0,0,0,0,0,0,0,0,14.763109092493,32.2556079747925,77.3759141303032,122.01723045,0,0,0,0,0,77.2055146343365,0,0,0,0,1.95484983186195,0,30.3095818253074,114.887031330301,13.0323650601762,1.58803092537181,12.5006088395685,0.951270761172991,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.414656231081544,1.58531948758658,0.25248486685276,0.126995788584338,0,0,22.2394179829517,0,0,0,246.351992306757,174.819987602145,104.067027579928,1.55126058909333,7.15312891703765,0,0.797814349754612,1.04007436911366,1.80045161983499,1.41849132023278,0.532844358032199,2.43062589218851,73.7965383332363,32.9296134712308,0.325736184293735,2.84313558994037,36.4297861549377,0.602878754119172,0,3.59902768255405,0,0,0,0,0,5.70547620162874,0,0.410952645100767,1.25342674267927,0,0.197030760201927,0.431255149719035,0.128343036279748,149.153544418586,58.5629342359298,29.3849748855524,41.5440338029185,38.914263850843,0,0,0,38.0343624329334,32.511083868879,23.0575270144775,0.623912584592421,0.178428988797162,0,0,0,0,5.17365356462525,0.664225598535437,2.21243002250044,8.51459421787212,290.960519989632,429.272423187381,0,0.431428401637234,0.213455115606889,0,0,1.81434175997808,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,24.3651316208196,15.2703083769289,52.6435070048517,15.5776328755086,53.5729844700412,0,0,0,0.459257792658427,1.0925470080403,2.22911505431021,46.9247597423708,19.7929416358346,119.221164914882,77.4537890662282,30.9266272656126,27.2960121770152,2.89159298970077,23.5348348551332,57.0640834954071,76.1359489498226,194.655632255683,3.82314409567557,5.81753206250107,49.2524460388792,0,0,6.15480300279334,20.6649226790815,7.15832468261467,12.0557983627835,0.0915694648183434,0.41254749960294,0,0,0,12.4705226596837,38.974300130005,40.5249701276982,11.9917818061542,22.9879324018106,35.0940399272433,34.0906509664404,18.2515673075812,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,1.73986598415015,0,0,122.067945149971,9.17500331684305,0.571890581771475,2.55897791311334,13.2661086290515,6.36406495851874,0,12.591072030832,25.257406735717,19.4390463870383,0,0,0.842516912477962,7.80213982543345,0,0,4.09499734223957,0.424216295861138,11.3008116620243,2.75682671773062,0,0,12.7330617538671,28.2034743380052,0.405820753925408,3.0982349809975,3.09865162785466,5.59304273595801,4.51945588660357,0.35667105148125,10.2880708580473,0.211107635297664,6.25660296623814,35.2910051602115,72.4364870907115,0,0.670302275535787,0,13.1801321087491,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0.79312517629427,37.3884248946156,0,0,65.2169144691273,78.1939134332331,45.8153471163787,21.522546818391,103.781273145065,18.3845155327072,37.889571307575,12.3356337304331,70.7608888845916,0,0.156679895773023,130.329928086835,50.9568251182826,0,0.201799707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| ||
|short_description=p1@CPXM1 | |short_description=p1@CPXM1 | ||
}} | }} |
Latest revision as of 23:49, 24 September 2015
Short description: | p1@CPXM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPXM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380605, ENST00000421947, NM_001184699, NM_019609, uc002wgu.2, uc010gas.2_5end |
EntrezGene: | CPXM1 |
HGNC: | 15771 |
UniProt: | Q96SM3Q8N2F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 4.54e-08 | 15 |
kidney tubule cell | 9.52e-07 | 10 |
nephron tubule epithelial cell | 9.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 1.02e-08 | 16 |
kidney epithelium | 1.02e-08 | 16 |
nephron epithelium | 4.54e-08 | 15 |
renal tubule | 4.54e-08 | 15 |
nephron tubule | 4.54e-08 | 15 |
nephron | 4.54e-08 | 15 |
uriniferous tubule | 4.54e-08 | 15 |
nephrogenic mesenchyme | 4.54e-08 | 15 |
kidney | 2.17e-07 | 26 |
kidney mesenchyme | 2.17e-07 | 26 |
upper urinary tract | 2.17e-07 | 26 |
kidney rudiment | 2.17e-07 | 26 |
kidney field | 2.17e-07 | 26 |
cavitated compound organ | 2.59e-07 | 31 |
compound organ | 3.45e-07 | 68 |
vasculature of organ | 4.00e-07 | 11 |
nephron tubule epithelium | 9.52e-07 | 10 |