FFCP PHASE1:Hg19::chr9:12701691..12701717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_ENST00000470909_5end | |association_with_transcript=46bp_to_ENST00000470909_5end | ||
|cluster_id=chr9:12701691..12701717,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_34_at_TYRP1_5end | |description=CAGE_peak_34_at_TYRP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!9.12e-60!10;CL:0000541!9.12e-60!10;CL:0000147!1.01e-42!14;CL:0000710!6.50e-30!20;CL:0002567!2.94e-23!3;CL:0000075!3.78e-22!27;CL:0002566!3.75e-18!1;CL:0002077!4.18e-18!33;CL:0000325!2.66e-15!39;CL:0000333!7.30e-14!41;CL:0000133!1.03e-09!59;CL:0000221!4.46e-08!71 | |ontology_enrichment_celltype=CL:0000148!9.12e-60!10;CL:0000541!9.12e-60!10;CL:0000147!1.01e-42!14;CL:0000710!6.50e-30!20;CL:0002567!2.94e-23!3;CL:0000075!3.78e-22!27;CL:0002566!3.75e-18!1;CL:0002077!4.18e-18!33;CL:0000325!2.66e-15!39;CL:0000333!7.30e-14!41;CL:0000133!1.03e-09!59;CL:0000221!4.46e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.29e-117;10!CL:0000147;2.84e-84;14!CL:0000710;3.03e-59;20!CL:0002567;1.53e-44;3!CL:0000075;4.38e-44;27!CL:0002566;3.05e-34;1!CL:0002077;7.86e-33;34!CL:0000149;1.44e-09;4 | |ontology_enrichment_celltype_v019=CL:0000148;1.29e-117;10!CL:0000147;2.84e-84;14!CL:0000710;3.03e-59;20!CL:0002567;1.53e-44;3!CL:0000075;4.38e-44;27!CL:0002566;3.05e-34;1!CL:0002077;7.86e-33;34!CL:0000149;1.44e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.29e-117,10;CL:0000541,1.29e-117,10;CL:0000147,2.84e-84,14;CL:0000710,3.03e-59,20;CL:0002567,1.53e-44,3;CL:0000075,4.38e-44,27;CL:0002077,3.73e-35,34;CL:0002566,3.61e-34,1;CL:0000333,6.20e-28,41;CL:0000133,7.27e-20,59;CL:0000221,1.82e-16,72;CL:0000149,1.44e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000133;8.69e-11;59!CL:0000221;4.27e-09;72 | |ontology_enrichment_development_v019=CL:0000133;8.69e-11;59!CL:0000221;4.27e-09;72 | ||
|ontology_enrichment_disease=DOID:1909!1.64e-33!2;DOID:3371!1.22e-17!1;DOID:4549!1.22e-17!1;DOID:5861!1.22e-17!1;DOID:6496!1.22e-17!1 | |ontology_enrichment_disease=DOID:1909!1.64e-33!2;DOID:3371!1.22e-17!1;DOID:4549!1.22e-17!1;DOID:5861!1.22e-17!1;DOID:6496!1.22e-17!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!9.12e-07!3;UBERON:0002418!9.64e-07!3;UBERON:0004755!9.64e-07!3 | |ontology_enrichment_uberon=UBERON:0002240!9.12e-07!3;UBERON:0002418!9.64e-07!3;UBERON:0004755!9.64e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p34@TYRP1 | |short_description=p34@TYRP1 | ||
}} | }} |
Latest revision as of 23:58, 24 September 2015
Short description: | p34@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 46bp_to_ENST00000470909_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.29e-117 | 10 |
melanoblast | 1.29e-117 | 10 |
pigment cell | 2.84e-84 | 14 |
neurecto-epithelial cell | 3.03e-59 | 20 |
light melanocyte | 1.53e-44 | 3 |
columnar/cuboidal epithelial cell | 4.38e-44 | 27 |
ecto-epithelial cell | 3.73e-35 | 34 |
dark melanocyte | 3.61e-34 | 1 |
migratory neural crest cell | 6.20e-28 | 41 |
neurectodermal cell | 7.27e-20 | 59 |
ectodermal cell | 1.82e-16 | 72 |
visual pigment cell | 1.44e-09 | 4 |