Personal tools

FFCP PHASE1:Hg19::chr11:8857215..8857232,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6764
|EntrezGene=6764
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=11350
|HGNC=11350
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-1bp_to_ENST00000529940_5end
|association_with_transcript=-1bp_to_ENST00000529940_5end
|cluster_id=chr11:8857215..8857232,-
|coexpression_cluster_id=C1007
|coexpression_cluster_id=C1007
|description=CAGE_peak_17_at_ST5_5end
|description=CAGE_peak_17_at_ST5_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0002541!9.45e-25!3;CL:0000349!2.64e-24!3;CL:0002577!2.64e-24!3;CL:0002536!7.90e-17!2;CL:0002537!4.75e-15!5
|ontology_enrichment_celltype=CL:0002541!9.45e-25!3;CL:0000349!2.64e-24!3;CL:0002577!2.64e-24!3;CL:0002536!7.90e-17!2;CL:0002537!4.75e-15!5
|ontology_enrichment_celltype_v019=CL:0000349;2.56e-83;19!CL:0002541;6.20e-41;3!CL:0002577;3.35e-40;3!CL:0002536;1.71e-27;2!CL:0002537;7.69e-25;5
|ontology_enrichment_celltype_v019=CL:0000349;2.56e-83;19!CL:0002541;6.20e-41;3!CL:0002577;3.35e-40;3!CL:0002536;1.71e-27;2!CL:0002537;7.69e-25;5
|ontology_enrichment_celltype_v019_2=CL:0000349,2.66e-83,19;CL:0002541,5.80e-41,3;CL:0002577,3.35e-40,3;CL:0002536,1.83e-27,2;CL:0002537,8.01e-25,5
|ontology_enrichment_development_v019=UBERON:0003124;1.97e-14;1
|ontology_enrichment_development_v019=UBERON:0003124;1.97e-14;1
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005631!2.69e-79!14;UBERON:0000158!2.69e-79!14;UBERON:0003124!1.17e-54!7;UBERON:0000478!2.00e-45!24;UBERON:0001987!1.05e-31!4;UBERON:0004340!1.05e-31!4;UBERON:0000305!2.42e-28!7;UBERON:0004871!8.58e-25!8;UBERON:0000476!9.45e-25!3;UBERON:0000920!9.45e-25!3;UBERON:0004923!6.55e-18!57
|ontology_enrichment_uberon=UBERON:0005631!2.69e-79!14;UBERON:0000158!2.69e-79!14;UBERON:0003124!1.17e-54!7;UBERON:0000478!2.00e-45!24;UBERON:0001987!1.05e-31!4;UBERON:0004340!1.05e-31!4;UBERON:0000305!2.42e-28!7;UBERON:0004871!8.58e-25!8;UBERON:0000476!9.45e-25!3;UBERON:0000920!9.45e-25!3;UBERON:0004923!6.55e-18!57
|ontology_enrichment_uberon_v019=UBERON:0005631;1.53e-84;10!UBERON:0000158;1.53e-84;10!UBERON:0000478;3.49e-78;24!UBERON:0001987;8.50e-53;4!UBERON:0000305;1.37e-47;7!UBERON:0003124;6.20e-41;3!UBERON:0000920;6.20e-41;3!UBERON:0004923;6.74e-09;55!UBERON:0000077;4.20e-08;27
|ontology_enrichment_uberon_v019=UBERON:0005631;1.53e-84;10!UBERON:0000158;1.53e-84;10!UBERON:0000478;3.49e-78;24!UBERON:0001987;8.50e-53;4!UBERON:0000305;1.37e-47;7!UBERON:0003124;6.20e-41;3!UBERON:0000920;6.20e-41;3!UBERON:0004923;6.74e-09;55!UBERON:0000077;4.20e-08;27
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.05e-134,14;UBERON:0000158,1.05e-134,14;UBERON:0003124,4.94e-92,7;UBERON:0000478,3.49e-78,24;UBERON:0001987,7.95e-53,4;UBERON:0004340,7.95e-53,4;UBERON:0000305,1.51e-47,7;UBERON:0004871,1.24e-41,8;UBERON:0000920,5.80e-41,3;UBERON:0004923,1.04e-27,66;UBERON:0000995,2.33e-10,21;UBERON:0005795,6.72e-10,22;UBERON:0003975,6.72e-10,22;UBERON:0004175,9.73e-09,25;UBERON:0000077,1.46e-07,29
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,9.82986174585775,6.33040747748289,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33440328590885,14.9791895559447,6.65258645325297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35605696581915,25.2419978707743,11.9792673818701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,8.61303131276183,19.3270922077929,19.1892519366708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72549954683083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,9.82986174585775,6.33040747748289,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33440328590885,14.9791895559447,6.65258645325297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35605696581915,25.2419978707743,11.9792673818701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,8.61303131276183,19.3270922077929,19.1892519366708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72549954683083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p17@ST5
|short_description=p17@ST5
}}
}}

Latest revision as of 23:58, 24 September 2015

Short description:p17@ST5
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_17_at_ST5_5end
Coexpression cluster:C1007_amniotic_chorionic_Placental_Amniotic_placenta_rectal_umbilical
Association with transcript: -1bp_to_ENST00000529940_5end
EntrezGene:ST5
HGNC: 11350
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20
25
30




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr11:8857215..8857232,-&oldid=4183052"