FFCP PHASE1:Hg19::chr11:8857248..8857269,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6764 | |EntrezGene=6764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |HGNC=11350 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMP1,E9PQM5,E9PKV3,E9PN93 | |UniProt=E9PMP1,E9PQM5,E9PKV3,E9PN93 | ||
|association_with_transcript=0bp_to_ENST00000530959,ENST00000531578,ENST00000533225,ENST00000534248_5end | |association_with_transcript=0bp_to_ENST00000530959,ENST00000531578,ENST00000533225,ENST00000534248_5end | ||
|cluster_id=chr11:8857248..8857269,- | |||
|coexpression_cluster_id=C1007 | |||
|description=CAGE_peak_16_at_ST5_5end | |description=CAGE_peak_16_at_ST5_5end | ||
|id=chr11:8857248..8857269,- | |id=chr11:8857248..8857269,- | ||
|ontology_enrichment_celltype=CL:0002541!8.55e-28!3;CL:0000349!8.61e-27!3;CL:0002577!8.61e-27!3;CL:0002536!1.20e-18!2;CL:0002537!8.12e-17!5;CL:0002568!8.99e-10!1 | |ontology_enrichment_celltype=CL:0002541!8.55e-28!3;CL:0000349!8.61e-27!3;CL:0002577!8.61e-27!3;CL:0002536!1.20e-18!2;CL:0002537!8.12e-17!5;CL:0002568!8.99e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.84e-89;19!CL:0002541;5.58e-44;3!CL:0002577;2.36e-42;3!CL:0002536;3.67e-29;2!CL:0002537;1.74e-26;5!CL:0000134;7.00e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.35e-89,19;CL:0002541,6.00e-44,3;CL:0002577,2.54e-42,3;CL:0002536,3.94e-29,2;CL:0002537,1.66e-26,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.92e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.05e-89!14;UBERON:0000158!5.05e-89!14;UBERON:0003124!3.41e-61!7;UBERON:0000478!6.60e-60!24;UBERON:0001987!3.38e-35!4;UBERON:0004340!3.38e-35!4;UBERON:0000305!9.76e-32!7;UBERON:0000476!8.55e-28!3;UBERON:0000920!8.55e-28!3;UBERON:0004871!9.05e-28!8;UBERON:0004923!1.95e-20!57;UBERON:0002370!2.77e-09!4;UBERON:0005058!2.77e-09!4;UBERON:0009113!2.77e-09!4;UBERON:0003295!2.77e-09!4;UBERON:0005562!2.77e-09!4;UBERON:0000995!7.20e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.60e-90;10!UBERON:0000158;1.60e-90;10!UBERON:0000478;1.34e-83;24!UBERON:0001987;5.94e-56;4!UBERON:0000305;9.66e-51;7!UBERON:0003124;5.58e-44;3!UBERON:0000920;5.58e-44;3!UBERON:0004923;1.63e-09;55!UBERON:0000077;1.34e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.71e-144,14;UBERON:0000158,7.71e-144,14;UBERON:0003124,3.76e-98,7;UBERON:0000478,1.39e-83,24;UBERON:0001987,5.94e-56,4;UBERON:0004340,5.94e-56,4;UBERON:0000305,9.66e-51,7;UBERON:0004871,1.97e-44,8;UBERON:0000920,6.00e-44,3;UBERON:0004923,8.88e-30,66;UBERON:0000995,5.56e-11,21;UBERON:0005795,1.70e-10,22;UBERON:0003975,1.70e-10,22;UBERON:0004175,2.88e-09,25;UBERON:0000077,5.07e-08,29 | |||
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|short_description=p16@ST5 | |short_description=p16@ST5 | ||
}} | }} |
Latest revision as of 23:59, 24 September 2015
Short description: | p16@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ST5_5end |
Coexpression cluster: | C1007_amniotic_chorionic_Placental_Amniotic_placenta_rectal_umbilical |
Association with transcript: | 0bp_to_ENST00000530959, ENST00000531578, ENST00000533225, ENST00000534248_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | E9PMP1E9PQM5E9PKV3E9PN93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.35e-89 | 19 |
chorionic membrane mesenchymal stem cell | 6.00e-44 | 3 |
placental epithelial cell | 2.54e-42 | 3 |
amniotic epithelial cell | 3.94e-29 | 2 |
amnion mesenchymal stem cell | 1.66e-26 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.71e-144 | 14 |
membranous layer | 7.71e-144 | 14 |
chorion | 3.76e-98 | 7 |
extraembryonic structure | 1.39e-83 | 24 |
placenta | 5.94e-56 | 4 |
allantois | 5.94e-56 | 4 |
amnion | 9.66e-51 | 7 |
somatic layer of lateral plate mesoderm | 1.97e-44 | 8 |
egg chorion | 6.00e-44 | 3 |
organ component layer | 8.88e-30 | 66 |
uterus | 5.56e-11 | 21 |
embryonic uterus | 1.70e-10 | 22 |
internal female genitalia | 1.70e-10 | 22 |
internal genitalia | 2.88e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 5.07e-08 | 29 |