FFCP PHASE1:Hg19::chr5:138940729..138940740,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7322 | |EntrezGene=7322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12475 | |HGNC=12475 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RP6,P62837 | |UniProt=Q96RP6,P62837 | ||
|association_with_transcript=-10bp_to_ENST00000253815,ENST00000398733,NM_003339,NM_181838,uc003leq.2,uc003ler.2_5end | |association_with_transcript=-10bp_to_ENST00000253815,ENST00000398733,NM_003339,NM_181838,uc003leq.2,uc003ler.2_5end | ||
|cluster_id=chr5:138940729..138940740,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_UBE2D2_5end | |description=CAGE_peak_13_at_UBE2D2_5end | ||
|id=chr5:138940729..138940740,+ | |id=chr5:138940729..138940740,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!3.38e-13!9;UBERON:0000125!3.38e-13!9;UBERON:0005743!5.06e-13!86;UBERON:0000073!1.46e-12!94;UBERON:0001016!1.46e-12!94;UBERON:0000988!5.03e-11!3;UBERON:0001017!5.19e-11!82;UBERON:0001049!5.86e-11!57;UBERON:0005068!5.86e-11!57;UBERON:0006241!5.86e-11!57;UBERON:0007135!5.86e-11!57;UBERON:0002616!1.51e-10!59;UBERON:0000955!1.48e-09!69;UBERON:0006238!1.48e-09!69;UBERON:0003075!2.80e-09!86;UBERON:0007284!2.80e-09!86;UBERON:0007023!9.16e-09!115;UBERON:0002346!1.11e-08!90;UBERON:0002148!2.54e-08!2;UBERON:0009662!2.54e-08!2;UBERON:0000369!5.06e-08!4;UBERON:0002435!5.06e-08!4;UBERON:0000204!5.06e-08!4;UBERON:0010082!5.06e-08!4;UBERON:0000153!5.77e-08!129;UBERON:0007811!5.77e-08!129;UBERON:0009663!9.21e-08!7;UBERON:0002020!1.15e-07!34;UBERON:0003528!1.15e-07!34;UBERON:0000033!1.24e-07!123;UBERON:0004121!1.39e-07!169;UBERON:0001893!1.69e-07!34;UBERON:0003056!1.99e-07!61;UBERON:0002780!2.30e-07!41;UBERON:0001890!2.30e-07!41;UBERON:0006240!2.30e-07!41;UBERON:0000924!2.82e-07!173;UBERON:0006601!2.82e-07!173;UBERON:0003080!3.83e-07!42;UBERON:0002298!5.64e-07!8 | |ontology_enrichment_uberon=UBERON:0002308!3.38e-13!9;UBERON:0000125!3.38e-13!9;UBERON:0005743!5.06e-13!86;UBERON:0000073!1.46e-12!94;UBERON:0001016!1.46e-12!94;UBERON:0000988!5.03e-11!3;UBERON:0001017!5.19e-11!82;UBERON:0001049!5.86e-11!57;UBERON:0005068!5.86e-11!57;UBERON:0006241!5.86e-11!57;UBERON:0007135!5.86e-11!57;UBERON:0002616!1.51e-10!59;UBERON:0000955!1.48e-09!69;UBERON:0006238!1.48e-09!69;UBERON:0003075!2.80e-09!86;UBERON:0007284!2.80e-09!86;UBERON:0007023!9.16e-09!115;UBERON:0002346!1.11e-08!90;UBERON:0002148!2.54e-08!2;UBERON:0009662!2.54e-08!2;UBERON:0000369!5.06e-08!4;UBERON:0002435!5.06e-08!4;UBERON:0000204!5.06e-08!4;UBERON:0010082!5.06e-08!4;UBERON:0000153!5.77e-08!129;UBERON:0007811!5.77e-08!129;UBERON:0009663!9.21e-08!7;UBERON:0002020!1.15e-07!34;UBERON:0003528!1.15e-07!34;UBERON:0000033!1.24e-07!123;UBERON:0004121!1.39e-07!169;UBERON:0001893!1.69e-07!34;UBERON:0003056!1.99e-07!61;UBERON:0002780!2.30e-07!41;UBERON:0001890!2.30e-07!41;UBERON:0006240!2.30e-07!41;UBERON:0000924!2.82e-07!173;UBERON:0006601!2.82e-07!173;UBERON:0003080!3.83e-07!42;UBERON:0002298!5.64e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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| ||
|short_description=p13@UBE2D2 | |short_description=p13@UBE2D2 | ||
}} | }} |
Latest revision as of 00:36, 25 September 2015
Short description: | p13@UBE2D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_UBE2D2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -10bp_to_ENST00000253815, ENST00000398733, NM_003339, NM_181838, uc003leq.2, uc003ler.2_5end |
EntrezGene: | UBE2D2 |
HGNC: | 12475 |
UniProt: | Q96RP6P62837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |