FFCP PHASE1:Hg19::chr1:212873200..212873230,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55509 | |EntrezGene=55509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28915 | |HGNC=28915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR55 | |UniProt=Q9NR55 | ||
|association_with_transcript=96bp_to_ENST00000243440,NM_018664,uc001hjl.1_5end | |association_with_transcript=96bp_to_ENST00000243440,NM_018664,uc001hjl.1_5end | ||
|cluster_id=chr1:212873200..212873230,- | |||
|coexpression_cluster_id=C1849 | |coexpression_cluster_id=C1849 | ||
|description=CAGE_peak_5_at_BATF3_5end | |description=CAGE_peak_5_at_BATF3_5end | ||
|id=chr1:212873200..212873230,- | |id=chr1:212873200..212873230,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:74;1.48e-08;2 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0009663;1.66e-08;7 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:74;1.48e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:74,2.25e-08,2;DOID:2531,5.97e-07,51;DOID:0060083,5.97e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.16e-10!34;UBERON:0003528!1.16e-10!34;UBERON:0001893!2.52e-10!34;UBERON:0001049!2.64e-10!57;UBERON:0005068!2.64e-10!57;UBERON:0006241!2.64e-10!57;UBERON:0007135!2.64e-10!57;UBERON:0003080!3.79e-10!42;UBERON:0002791!5.30e-10!33;UBERON:0001017!8.49e-10!82;UBERON:0001869!1.17e-09!32;UBERON:0002780!1.44e-09!41;UBERON:0001890!1.44e-09!41;UBERON:0006240!1.44e-09!41;UBERON:0000073!2.16e-09!94;UBERON:0001016!2.16e-09!94;UBERON:0005743!4.90e-09!86;UBERON:0000955!1.57e-07!69;UBERON:0006238!1.57e-07!69;UBERON:0002616!1.95e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;1.66e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,1.15e-08,7;UBERON:0002420,9.58e-07,9;UBERON:0000125,9.58e-07,9;UBERON:0007245,9.58e-07,9;UBERON:0002308,9.58e-07,9;UBERON:0010009,9.58e-07,9;UBERON:0010011,9.58e-07,9;UBERON:0000454,9.58e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0.764134057479513,1.55991119954897,1.25937250101887,0.393364276848904,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.845021145247767,0.212604299965044,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,2.85012743741249,0.59675003159727,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,3.57002133020152,2.08955684759121,1.72845348674525,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0.735326160691737,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0.936480230490962,1.71141546463335,0.896692083310806,0.939475989150119,0.485618833104395,0.280901613404497,0,0.368502951935304,0,1.18800285728205,0.494533858557114,0,0.718618141816238,0,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0,0,0.473227200159376,0,0,0.110293972732394,0.435758888184812,0.474541238222193,0.269662616320329,0,0.769494313892781,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0.982827216677626,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.432359860250884,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.672786506072164,0,0.51336800074665,0,0,1.690605505112,0.26593811658487,0,1.02882949704857,0,0.532844358032199,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,3.25046917581229,0,0,0.256686072559497,0.254094624222463,1.30139853857622,0.773288812777695,0.670065061337395,1.91381625495949,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0.195801157462741,0,0,0,0.533637789017222,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.739144404124282,0,1.04589340613963,0,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0.732555718546747,0.247528499761764,0,0,0,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.636406495851874,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.845086807596724,0,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.427296284509893,0,0,0,0,0.0711418433484141,2.07254154547469,0,0.191505370132367,0.423347165447766,0,0.561594356226918,0.456469358066384,0.783399478865116,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0,0.834245708559542,2.9308214310306,0,0,0,0,0,0,0,0,5.34928244531896,0.284136146806413,0,0,0,0,0.984685914873589,0,35.1032252102998,0,0,0.828851746593443,0,0,0.492339221844278,0.622079175323615,0.179736702294654,0.179021174675609,1.02314474045374,0.295930216910801,0,0,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0.236387681767936,1.03423011972439,0,0.868124974666461,0.885741385813839,1.32656082487949,0,0.110579259931225,0,0.438770794307945,0.21787692703798,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.274792780205587,1.06606955203727,0,1.2558420511602,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0.611030144933625,16.9017043347955,20.5116138651195,19.7357484565311,0.134802265961354,0,0.702793337176017,0,0.19566461893209,0.242780379534093,0,1.20990716048664,0.30607276163049,0.252746318513952,0.450970258243478,0.414752765588989,2.65861549082874,0.661983911750998,1.2557316736289,3.58417289318877,0.284609546029793,0,0,0,0.261177619741208,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0.225980740780532,0.685209623233754,0,0.316553979779393,0,0,0.426905989478705,0.799238438328521,0,0.114536596165916,0,0,0,0,0.407712618220842,0.836822770498666,0.203996435272644,0,1.80126086612937,0.547621515567972,0,0,6.04640914842423,0.279282401272254,0,0,0.399358000997982,0,0.446342914883745,0.201550417460179,0.360299883542404,0,0,0.0824158583811665,0,0.196854963029498,3.13291328643403,0,0.817220436669454,0,0,0,0,0,0.485996453264197,0,0.315222829196793,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0.328370082997356,0,0.453248366080503,0.146552233678082,0,0.258565912723101,0.66116300871345,2.9084762440336,0,0.640724475406168,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,1.63205341010842,0.5013797880454,0,0.327872630709804,0.157054096250234,0.886068179966986,0.366078794705889,0.250381861413,0,0.443716206147409,0.248385611765534,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0.434763085832475,0.149254802886874,0.233713309847224,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0.363697318405119,0,1.39210127963548,0,0,0,0,0,0.57785949122191,0,0.260994291965212,0,0,0.734210113519403,0.537266523244462,0,0.219284049578707,1.41351316756705,0.578742114812744,0.506827321959218,0,0,0,0.276516872303462,0.389720617678777,0.531459361253452,0.163565394255844,0.327609848846413,0.245772908753719,0,7.79950843834227,1.17360902663555,5.16644938982447,0,2.20927140302209,0,0,0.127894371303652,0.215649622793364,0,0.109209638192014,0.169732529954025,0,0.123935764259002,2.79322458986622,0.318004350653419,0.0788617450012534,0,0.705351887381368,0.6124909547064,0.321146125482298,0,0.957803154342908,0.41023272848151,0.252071696221718,0.345786262321089,0.322951291263702,0,0,0,0,0,0,1.3807198521202,0.596748666348824,0.300841313397029,0,0,0.261906694481422,1.14640342257068,0,0.405225507710368,2.34323429584154,0.206686796501184,0.19024743058172,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0.921871900446234,0,0.203909198930495,0.328863867814245,0.590969204419841,0.111231401892069,0.078493092850514,1.57115589916002,0,0,0.431855182437243,0,0,0.158013611732727,0.116241425368125,0.695433089210318,0.801711364730253,0,0,0,0,0,0.426067023795788,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0.701818390386317,0.198950775161368,0.118920090777569,0,0.439762066981716,0.603851374266694,0.0771741581079447,0.437119121007915,0,0.490296643507811,0,0.785233868459781,0.297046400327086,0.4226557275834,0.339854229375634,1.2217909337381,0.902410431630081,0.699588091474503,0,0,0,0.730336388246517,0,2.00675416412032,0.157771562193185,0.135982980381829,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0.227336094654718,0,0.829169439458779,0.620597975171371,0,0,0.322944549180031,0.248298857183432,0.672791175483681,0.12729431655633,0,0,0,0.202056159043763,0.358611026963382,0.665320713092027,0.488419611665847,0.533636729388577,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0.764134057479513,1.55991119954897,1.25937250101887,0.393364276848904,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.845021145247767,0.212604299965044,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,2.85012743741249,0.59675003159727,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,3.57002133020152,2.08955684759121,1.72845348674525,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0.735326160691737,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0.936480230490962,1.71141546463335,0.896692083310806,0.939475989150119,0.485618833104395,0.280901613404497,0,0.368502951935304,0,1.18800285728205,0.494533858557114,0,0.718618141816238,0,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0,0,0.473227200159376,0,0,0.110293972732394,0.435758888184812,0.474541238222193,0.269662616320329,0,0.769494313892781,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0.982827216677626,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.432359860250884,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.672786506072164,0,0.51336800074665,0,0,1.690605505112,0.26593811658487,0,1.02882949704857,0,0.532844358032199,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,3.25046917581229,0,0,0.256686072559497,0.254094624222463,1.30139853857622,0.773288812777695,0.670065061337395,1.91381625495949,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0.195801157462741,0,0,0,0.533637789017222,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.739144404124282,0,1.04589340613963,0,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0.732555718546747,0.247528499761764,0,0,0,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.636406495851874,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.845086807596724,0,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.427296284509893,0,0,0,0,0.0711418433484141,2.07254154547469,0,0.191505370132367,0.423347165447766,0,0.561594356226918,0.456469358066384,0.783399478865116,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0,0.834245708559542,2.9308214310306,0,0,0,0,0,0,0,0,5.34928244531896,0.284136146806413,0,0,0,0,0.984685914873589,0,35.1032252102998,0,0,0.828851746593443,0,0,0.492339221844278,0.622079175323615,0.179736702294654,0.179021174675609,1.02314474045374,0.295930216910801,0,0,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0.236387681767936,1.03423011972439,0,0.868124974666461,0.885741385813839,1.32656082487949,0,0.110579259931225,0,0.438770794307945,0.21787692703798,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.274792780205587,1.06606955203727,0,1.2558420511602,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0.611030144933625,16.9017043347955,20.5116138651195,19.7357484565311,0.134802265961354,0,0.702793337176017,0,0.19566461893209,0.242780379534093,0,1.20990716048664,0.30607276163049,0.252746318513952,0.450970258243478,0.414752765588989,2.65861549082874,0.661983911750998,1.2557316736289,3.58417289318877,0.284609546029793,0,0,0,0.261177619741208,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0.225980740780532,0.685209623233754,0,0.316553979779393,0,0,0.426905989478705,0.799238438328521,0,0.114536596165916,0,0,0,0,0.407712618220842,0.836822770498666,0.203996435272644,0,1.80126086612937,0.547621515567972,0,0,6.04640914842423,0.279282401272254,0,0,0.399358000997982,0,0.446342914883745,0.201550417460179,0.360299883542404,0,0,0.0824158583811665,0,0.196854963029498,3.13291328643403,0,0.817220436669454,0,0,0,0,0,0.485996453264197,0,0.315222829196793,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0.328370082997356,0,0.453248366080503,0.146552233678082,0,0.258565912723101,0.66116300871345,2.9084762440336,0,0.640724475406168,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,1.63205341010842,0.5013797880454,0,0.327872630709804,0.157054096250234,0.886068179966986,0.366078794705889,0.250381861413,0,0.443716206147409,0.248385611765534,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0.434763085832475,0.149254802886874,0.233713309847224,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0.363697318405119,0,1.39210127963548,0,0,0,0,0,0.57785949122191,0,0.260994291965212,0,0,0.734210113519403,0.537266523244462,0,0.219284049578707,1.41351316756705,0.578742114812744,0.506827321959218,0,0,0,0.276516872303462,0.389720617678777,0.531459361253452,0.163565394255844,0.327609848846413,0.245772908753719,0,7.79950843834227,1.17360902663555,5.16644938982447,0,2.20927140302209,0,0,0.127894371303652,0.215649622793364,0,0.109209638192014,0.169732529954025,0,0.123935764259002,2.79322458986622,0.318004350653419,0.0788617450012534,0,0.705351887381368,0.6124909547064,0.321146125482298,0,0.957803154342908,0.41023272848151,0.252071696221718,0.345786262321089,0.322951291263702,0,0,0,0,0,0,1.3807198521202,0.596748666348824,0.300841313397029,0,0,0.261906694481422,1.14640342257068,0,0.405225507710368,2.34323429584154,0.206686796501184,0.19024743058172,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0.921871900446234,0,0.203909198930495,0.328863867814245,0.590969204419841,0.111231401892069,0.078493092850514,1.57115589916002,0,0,0.431855182437243,0,0,0.158013611732727,0.116241425368125,0.695433089210318,0.801711364730253,0,0,0,0,0,0.426067023795788,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0.701818390386317,0.198950775161368,0.118920090777569,0,0.439762066981716,0.603851374266694,0.0771741581079447,0.437119121007915,0,0.490296643507811,0,0.785233868459781,0.297046400327086,0.4226557275834,0.339854229375634,1.2217909337381,0.902410431630081,0.699588091474503,0,0,0,0.730336388246517,0,2.00675416412032,0.157771562193185,0.135982980381829,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0.227336094654718,0,0.829169439458779,0.620597975171371,0,0,0.322944549180031,0.248298857183432,0.672791175483681,0.12729431655633,0,0,0,0.202056159043763,0.358611026963382,0.665320713092027,0.488419611665847,0.533636729388577,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p5@BATF3 | |short_description=p5@BATF3 | ||
}} | }} |
Latest revision as of 00:43, 25 September 2015
Short description: | p5@BATF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BATF3_5end |
Coexpression cluster: | C1849_anaplastic_cord_hairy_mycosis_adult_myeloma_NK |
Association with transcript: | 96bp_to_ENST00000243440, NM_018664, uc001hjl.1_5end |
EntrezGene: | BATF3 |
HGNC: | 28915 |
UniProt: | Q9NR55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 1.15e-08 | 7 |
basal ganglion | 9.58e-07 | 9 |
neural nucleus | 9.58e-07 | 9 |
nuclear complex of neuraxis | 9.58e-07 | 9 |
nucleus of brain | 9.58e-07 | 9 |
aggregate regional part of brain | 9.58e-07 | 9 |
collection of basal ganglia | 9.58e-07 | 9 |
cerebral subcortex | 9.58e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system disease | 2.25e-08 | 2 |
hematologic cancer | 5.97e-07 | 51 |
immune system cancer | 5.97e-07 | 51 |