FFCP PHASE1:Hg19::chr14:64565442..64565481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23224 | |EntrezGene=23224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17084 | |HGNC=17084 | ||
|TSSclassifier=strong | |||
|UniProt=G3V403 | |UniProt=G3V403 | ||
|association_with_transcript=0bp_to_ENST00000553308,uc010apz.1_5end | |association_with_transcript=0bp_to_ENST00000553308,uc010apz.1_5end | ||
|cluster_id=chr14:64565442..64565481,+ | |||
|description=CAGE_peak_24_at_SYNE2_5end | |description=CAGE_peak_24_at_SYNE2_5end | ||
|id=chr14:64565442..64565481,+ | |id=chr14:64565442..64565481,+ | ||
|ontology_enrichment_celltype=CL:0000775;1.03e-17;3!CL:0000094;1.75e-07;8 | |ontology_enrichment_celltype=CL:0000242!4.46e-08!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000775;1.03e-17;3!CL:0000094;1.75e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,9.46e-18,3;CL:0000094,1.69e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.12e-21;10!UBERON:0007687;8.12e-21;10!UBERON:0003104;1.15e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002113;2.51e-09;24!UBERON:0011143;2.51e-09;24!UBERON:0000489;6.79e-08;29!UBERON:0006554;1.15e-07;30!UBERON:0001008;1.15e-07;30!UBERON:0001155;7.91e-07;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.51e-09;24!UBERON:0011143;2.51e-09;24!UBERON:0000489;6.79e-08;29!UBERON:0006554;1.15e-07;30!UBERON:0001008;1.15e-07;30!UBERON:0001155;7.91e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.11e-08,26;UBERON:0003918,1.11e-08,26;UBERON:0011143,1.11e-08,26;UBERON:0005095,1.11e-08,26;UBERON:0007687,1.11e-08,26;UBERON:0000489,1.92e-07,31;UBERON:0001155,7.91e-07,9 | |||
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| ||
|short_description=p24@SYNE2 | |short_description=p24@SYNE2 | ||
}} | }} |
Latest revision as of 00:51, 25 September 2015
Short description: | p24@SYNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SYNE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000553308, uc010apz.1_5end |
EntrezGene: | SYNE2 |
HGNC: | 17084 |
UniProt: | G3V403 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 9.46e-18 | 3 |
granulocyte | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.11e-08 | 26 |
kidney mesenchyme | 1.11e-08 | 26 |
upper urinary tract | 1.11e-08 | 26 |
kidney rudiment | 1.11e-08 | 26 |
kidney field | 1.11e-08 | 26 |
cavitated compound organ | 1.92e-07 | 31 |
colon | 7.91e-07 | 9 |