FFCP PHASE1:Hg19::chr3:13921498..13921503,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:13921498..13921503,- to FFCP PHASE1:Hg19::chr3:13921498..13921503,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7476 | |EntrezGene=7476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12786 | |HGNC=12786 | ||
|TSSclassifier=strong | |||
|UniProt=O00755 | |UniProt=O00755 | ||
|association_with_transcript=114bp_to_ENST00000285018,NM_004625,uc003bye.1_5end | |||
|cluster_id=chr3:13921498..13921503,- | |||
|coexpression_cluster_id=C1269 | |||
|description=CAGE_peak_6_at_WNT7A_5end | |||
|id=chr3:13921498..13921503,- | |||
|ontology_enrichment_celltype=CL:0002076!1.57e-12!43;CL:0002159!2.11e-09!13;CL:0002368!4.02e-09!13;CL:0000223!2.22e-08!59;CL:0000244!8.55e-08!4;CL:0000731!8.55e-08!4;CL:0000066!9.88e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.92e-23;4!CL:0000731;2.92e-23;4!CL:0000575;7.76e-21;2!CL:0002328;3.16e-14;3!CL:1001319;9.55e-12;1!CL:1000600;9.55e-12;1!CL:0000313;9.55e-12;1!CL:0002159;1.33e-11;14!CL:0002202;1.58e-10;9!CL:0002632;1.58e-10;9!CL:0000312;6.69e-09;5!CL:0000240;1.47e-07;6!CL:0000311;1.47e-07;6!CL:0000079;1.47e-07;6!CL:0000237;1.47e-07;6!CL:0002368;1.92e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.60e-23,4;CL:0000731,1.60e-23,4;CL:0000575,1.74e-20,2;CL:0002328,1.98e-14,3;CL:0000313,8.62e-12,1;CL:1001319,9.57e-12,1;CL:1000600,9.57e-12,1;CL:0002159,1.77e-11,14;CL:0002202,1.53e-10,9;CL:0002632,1.53e-10,9;CL:0000312,7.26e-09,5;CL:0000240,1.57e-07,6;CL:0000311,1.57e-07,6;CL:0000079,1.57e-07,6;CL:0000237,1.57e-07,6;CL:0000036,1.57e-07,6;CL:0000357,1.57e-07,6;CL:0000114,1.57e-07,6;CL:0002368,1.88e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000357;1.47e-07;6!CL:0000114;1.47e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;9.55e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.33e-11!34;UBERON:0003528!1.33e-11!34;UBERON:0001869!1.48e-11!32;UBERON:0001893!1.35e-10!34;UBERON:0000924!1.65e-10!173;UBERON:0006601!1.65e-10!173;UBERON:0004121!1.82e-10!169;UBERON:0002619!2.78e-10!22;UBERON:0002780!5.31e-10!41;UBERON:0001890!5.31e-10!41;UBERON:0006240!5.31e-10!41;UBERON:0001950!5.93e-10!20;UBERON:0002791!1.07e-09!33;UBERON:0001049!1.22e-09!57;UBERON:0005068!1.22e-09!57;UBERON:0006241!1.22e-09!57;UBERON:0007135!1.22e-09!57;UBERON:0003080!1.23e-09!42;UBERON:0000365!1.82e-09!5;UBERON:0001017!6.85e-09!82;UBERON:0000956!1.15e-08!25;UBERON:0000203!1.15e-08!25;UBERON:0000955!2.44e-08!69;UBERON:0006238!2.44e-08!69;UBERON:0000064!3.45e-08!219;UBERON:0002616!3.55e-08!59;UBERON:0005743!3.99e-08!86;UBERON:0005631!7.68e-08!14;UBERON:0000158!7.68e-08!14;UBERON:0000033!8.59e-08!123;UBERON:0005910!9.32e-08!6;UBERON:0000153!5.24e-07!129;UBERON:0007811!5.24e-07!129;UBERON:0003075!6.49e-07!86;UBERON:0007284!6.49e-07!86;UBERON:0002346!6.64e-07!90;UBERON:0003056!9.89e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.19e-32;5!UBERON:0005910;2.84e-27;6!UBERON:0000486;5.94e-21;12!UBERON:0004815;3.16e-14;3!UBERON:0002031;3.16e-14;3!UBERON:0004645;9.55e-12;1!UBERON:0004911;9.55e-12;1!UBERON:0001256;9.55e-12;1!UBERON:0001259;9.55e-12;1!UBERON:0000964;6.63e-11;4!UBERON:0010409;6.63e-11;4!UBERON:0005911;1.47e-10;36!UBERON:0002185;6.69e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.26e-33,5;UBERON:0005910,1.67e-27,6;UBERON:0004815,1.98e-14,3;UBERON:0002031,1.98e-14,3;UBERON:0004911,8.62e-12,1;UBERON:0004645,9.57e-12,1;UBERON:0001256,9.57e-12,1;UBERON:0001259,9.57e-12,1;UBERON:0000964,9.90e-11,4;UBERON:0010409,9.90e-11,4;UBERON:0004348,9.90e-11,4;UBERON:0005427,9.90e-11,4;UBERON:0002185,5.07e-09,5;UBERON:0005157,3.11e-07,47;UBERON:0005911,6.09e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,1.83884244895785,1.50602959389125,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.180258620683,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.296573126324121,1.07016331235885,0,0.113309342697566,0,0,0,0.637130828648193,0,0,0,0,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.63647672354501,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,0,1.60846355858609,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0.0895585227028483,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.828728900423067,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0.384380134730212,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0.188287601553558,0.43050537267123,1.68471475667626,1.7737206141467,2.06751060186264,0,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0,0,0,0.455173793141999,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0.139423744278603,0,0,0.23056390438806,0.269272933229316,0.217294743844016,0.957003479195758,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.586993856796269,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0.261177619741208,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.756215088665154,0.138314504928436,0.161475645631851,0,0.392590874004102,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.19024743058172,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.131545547125698,0,0.333694205676207,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.62041277132864,0.955538938977433,2.9082412267426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0.705789743431384,0,0,0,0,0,0.339957450954573,1.30905207102113,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,2.68630786416216,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,1.83884244895785,1.50602959389125,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.180258620683,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.296573126324121,1.07016331235885,0,0.113309342697566,0,0,0,0.637130828648193,0,0,0,0,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.63647672354501,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,0,1.60846355858609,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0.0895585227028483,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.828728900423067,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0.384380134730212,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0.188287601553558,0.43050537267123,1.68471475667626,1.7737206141467,2.06751060186264,0,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0,0,0,0.455173793141999,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0.139423744278603,0,0,0.23056390438806,0.269272933229316,0.217294743844016,0.957003479195758,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.586993856796269,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0.261177619741208,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.443175571691151,0,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.756215088665154,0.138314504928436,0.161475645631851,0,0.392590874004102,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.19024743058172,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.131545547125698,0,0.333694205676207,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.62041277132864,0.955538938977433,2.9082412267426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0.705789743431384,0,0,0,0,0,0.339957450954573,1.30905207102113,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,2.68630786416216,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@WNT7A | |||
}} | }} |
Latest revision as of 01:55, 25 September 2015
Short description: | p6@WNT7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WNT7A_5end |
Coexpression cluster: | C1269_serous_Urothelial_clear_Gingival_Renal_choriocarcinoma_Corneal |
Association with transcript: | 114bp_to_ENST00000285018, NM_004625, uc003bye.1_5end |
EntrezGene: | WNT7A |
HGNC: | 12786 |
UniProt: | O00755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.60e-23 | 4 |
urothelial cell | 1.60e-23 | 4 |
corneal epithelial cell | 1.74e-20 | 2 |
bronchial epithelial cell | 1.98e-14 | 3 |
serous secreting cell | 8.62e-12 | 1 |
bladder cell | 9.57e-12 | 1 |
lower urinary tract cell | 9.57e-12 | 1 |
general ecto-epithelial cell | 1.77e-11 | 14 |
epithelial cell of tracheobronchial tree | 1.53e-10 | 9 |
epithelial cell of lower respiratory tract | 1.53e-10 | 9 |
keratinocyte | 7.26e-09 | 5 |
stratified squamous epithelial cell | 1.57e-07 | 6 |
keratin accumulating cell | 1.57e-07 | 6 |
stratified epithelial cell | 1.57e-07 | 6 |
keratinizing barrier epithelial cell | 1.57e-07 | 6 |
epithelial fate stem cell | 1.57e-07 | 6 |
stratified epithelial stem cell | 1.57e-07 | 6 |
surface ectodermal cell | 1.57e-07 | 6 |
respiratory epithelial cell | 1.88e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
urothelium | 6.26e-33 | 5 |
transitional epithelium | 1.67e-27 | 6 |
lower respiratory tract epithelium | 1.98e-14 | 3 |
epithelium of bronchus | 1.98e-14 | 3 |
epithelium of female gonad | 8.62e-12 | 1 |
urinary bladder urothelium | 9.57e-12 | 1 |
wall of urinary bladder | 9.57e-12 | 1 |
mucosa of urinary bladder | 9.57e-12 | 1 |
cornea | 9.90e-11 | 4 |
eye surface | 9.90e-11 | 4 |
optic eminence | 9.90e-11 | 4 |
corneal primordium | 9.90e-11 | 4 |
bronchus | 5.07e-09 | 5 |
epithelial fold | 3.11e-07 | 47 |
endo-epithelium | 6.09e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.62e-12 | 1 |