FFCP PHASE1:Hg19::chr7:107883711..107883718,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=strong | |||
|UniProt=C9JH43 | |UniProt=C9JH43 | ||
|association_with_transcript=-27bp_to_ENST00000417701_5end | |association_with_transcript=-27bp_to_ENST00000417701_5end | ||
|cluster_id=chr7:107883711..107883718,- | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_29_at_NRCAM_5end | |description=CAGE_peak_29_at_NRCAM_5end | ||
|id=chr7:107883711..107883718,- | |id=chr7:107883711..107883718,- | ||
|ontology_enrichment_celltype=CL:0000064!3.11e-27!3;CL:0005012!3.11e-27!3;CL:0000067!3.11e-27!3;CL:0002304!3.11e-27!3;CL:0000075!3.02e-07!27 | |ontology_enrichment_celltype=CL:0000064!3.11e-27!3;CL:0005012!3.11e-27!3;CL:0000067!3.11e-27!3;CL:0002304!3.11e-27!3;CL:0000075!3.02e-07!27 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001778!3.11e-27!3;UBERON:0001775!3.11e-27!3;UBERON:0001882!7.72e-21!1;UBERON:0005403!7.72e-21!1;UBERON:0002022!9.43e-21!1;UBERON:0000488!1.05e-20!4;UBERON:0003056!4.53e-20!61;UBERON:0003075!5.25e-18!86;UBERON:0007284!5.25e-18!86;UBERON:0002346!3.36e-17!90;UBERON:0007625!7.09e-17!11;UBERON:0002203!3.71e-14!6;UBERON:0001768!3.71e-14!6;UBERON:0001801!2.07e-13!14;UBERON:0001894!1.78e-12!7;UBERON:0006222!1.78e-12!7;UBERON:0000033!2.06e-12!123;UBERON:0001049!3.22e-12!57;UBERON:0005068!3.22e-12!57;UBERON:0006241!3.22e-12!57;UBERON:0007135!3.22e-12!57;UBERON:0002780!6.47e-12!41;UBERON:0001890!6.47e-12!41;UBERON:0006240!6.47e-12!41;UBERON:0000153!7.99e-12!129;UBERON:0007811!7.99e-12!129;UBERON:0002616!8.27e-12!59;UBERON:0003080!1.22e-11!42;UBERON:0001897!2.02e-11!2;UBERON:0000019!4.72e-10!19;UBERON:0000047!4.72e-10!19;UBERON:0004088!4.72e-10!19;UBERON:0003072!4.72e-10!19;UBERON:0003071!4.72e-10!19;UBERON:0004128!4.72e-10!19;UBERON:0000955!5.77e-10!69;UBERON:0006238!5.77e-10!69;UBERON:0000970!1.40e-09!20;UBERON:0002104!3.75e-09!21;UBERON:0001456!3.75e-09!21;UBERON:0004121!6.91e-09!169;UBERON:0000924!1.13e-08!173;UBERON:0006601!1.13e-08!173;UBERON:0000020!2.08e-08!23;UBERON:0001017!2.10e-08!82;UBERON:0002200!3.76e-08!11;UBERON:0006876!3.76e-08!11;UBERON:0001032!4.41e-08!24;UBERON:0004456!4.41e-08!24;UBERON:0005743!5.15e-08!86;UBERON:0001896!6.34e-08!3;UBERON:0005290!6.34e-08!3;UBERON:0010096!6.34e-08!3;UBERON:0000073!2.96e-07!94;UBERON:0001016!2.96e-07!94;UBERON:0005085!8.77e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;4.52e-50;2!UBERON:0010225;4.52e-50;2!UBERON:0002784;7.14e-26;4!UBERON:0001894;1.91e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,4.52e-50,2;UBERON:0010225,4.52e-50,2;UBERON:0002784,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7 | |||
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|short_description=p29@NRCAM | |short_description=p29@NRCAM | ||
}} | }} |
Latest revision as of 02:38, 25 September 2015
Short description: | p29@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_NRCAM_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | -27bp_to_ENST00000417701_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JH43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 4.52e-50 | 2 |
thalamic complex | 4.52e-50 | 2 |
regional part of diencephalon | 7.14e-26 | 4 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |