FFCP PHASE1:Hg19::chr1:100598448..100598532,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:100598448..100598532,- to FFCP PHASE1:Hg19::chr1:100598448..100598532,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=163786 | |EntrezGene=163786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25403 | |HGNC=25403 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UVJ0,B4DYM7 | |UniProt=Q6UVJ0,B4DYM7 | ||
|association_with_transcript=0bp_to_ENST00000287482,ENST00000462159,ENST00000539329,NM_194292,uc001dsu.2,uc009wdz.2_5end | |||
|cluster_id=chr1:100598448..100598532,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_SASS6_5end | |||
|id=chr1:100598448..100598532,- | |||
|ontology_enrichment_celltype=CL:0000945!2.63e-07!24;CL:0000826!2.63e-07!24;CL:0000542!5.28e-07!53;CL:0000051!5.28e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.44e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.60e-07,24;CL:0000826,2.60e-07,24;CL:0000542,5.23e-07,53;CL:0000051,5.23e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.12e-53!235;DOID:14566!1.18e-51!239;DOID:0050687!3.72e-28!143;DOID:0050686!5.84e-27!137;DOID:305!5.27e-24!106;DOID:2531!1.09e-23!51;DOID:0060083!1.09e-23!51;DOID:1240!3.03e-20!39;DOID:8692!2.28e-16!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.35e-16;39!DOID:8692;5.32e-16;31!DOID:2531;9.39e-15;51!DOID:0060083;9.39e-15;51!DOID:0050687;9.62e-08;143!DOID:305;2.75e-07;106!DOID:0050686;3.09e-07;137!DOID:14566;5.43e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.35e-53,235;DOID:14566,1.51e-51,239;DOID:0050687,4.35e-28,143;DOID:0050686,7.84e-27,137;DOID:305,5.85e-24,106;DOID:2531,1.05e-23,51;DOID:0060083,1.05e-23,51;DOID:1240,2.92e-20,39;DOID:8692,2.21e-16,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SASS6 | |||
}} | }} |
Latest revision as of 04:03, 25 September 2015
Short description: | p1@SASS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SASS6_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000287482, ENST00000462159, ENST00000539329, NM_194292, uc001dsu.2, uc009wdz.2_5end |
EntrezGene: | SASS6 |
HGNC: | 25403 |
UniProt: | Q6UVJ0B4DYM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.60e-07 | 24 |
pro-B cell | 2.60e-07 | 24 |
lymphocyte | 5.23e-07 | 53 |
common lymphoid progenitor | 5.23e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.35e-53 | 235 |
disease of cellular proliferation | 1.51e-51 | 239 |
cell type cancer | 4.35e-28 | 143 |
organ system cancer | 7.84e-27 | 137 |
carcinoma | 5.85e-24 | 106 |
hematologic cancer | 1.05e-23 | 51 |
immune system cancer | 1.05e-23 | 51 |
leukemia | 2.92e-20 | 39 |
myeloid leukemia | 2.21e-16 | 31 |