FFCP PHASE1:Hg19::chr1:100598641..100598663,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:100598641..100598663,-
|short_description=p3@SASS6
|description=CAGE_peak_3_at_SASS6_5end
|association_with_transcript=-130bp_to_ENST00000287482,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=163786 | |EntrezGene=163786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25403 | |HGNC=25403 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UVJ0,B4DYM7 | |UniProt=Q6UVJ0,B4DYM7 | ||
|association_with_transcript=-130bp_to_ENST00000287482,ENST00000462159,ENST00000539329,NM_194292,uc001dsu.2,uc009wdz.2_5end | |||
|cluster_id=chr1:100598641..100598663,- | |||
|description=CAGE_peak_3_at_SASS6_5end | |||
|id=chr1:100598641..100598663,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.19e-16!143;DOID:162!2.41e-15!235;DOID:305!3.04e-15!106;DOID:14566!5.87e-15!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.33e-10;14!DOID:305;6.18e-07;106!DOID:3910;6.71e-07;2!DOID:4468;6.71e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.13e-23,106;DOID:0050687,3.33e-17,143;DOID:162,3.47e-14,235;DOID:14566,1.14e-13,239;DOID:1749,3.21e-10,14;DOID:7,2.14e-07,39;DOID:4468,5.18e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.71e-07;2!UBERON:0002173;6.71e-07;2!UBERON:0002186;6.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.408001382488506,0,0.85870796139317,0.684372125364421,0.251085279189606,0.382067028739756,0.328402357799783,0.550975469195755,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0.995184627411951,0.293600439334847,0,0.200544447470142,0.651032612147555,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0.689491361473237,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0.422510572623884,0,0.209658645508376,0.22465726229299,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,1.90810750907073,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0,0,0,0.276350017785848,0.869409257205157,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0.534880391567015,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.472674085820339,0,0.527008714158756,0.785874452986276,0.364295288292542,0,0,0,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0.417989933073621,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0.298897361103602,0.587172493218824,0.485618833104395,0.702254033511242,0,0.245668634623536,0.103325781175765,1.18800285728205,0,0,0,0.336672227908132,1.00094815897571,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.515262646192195,0.257640540045629,0,0.337552664482532,0.194874010322397,0.504867548488229,0.0920498986422993,0.323292113637624,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0.487894824518382,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,1.09493207722749,0,0,0,0,0,0.236613600079688,0.674338760312407,0.241011029883482,0.661763836394364,0.217879444092406,0.474541238222193,0.943819157121151,0.392442930250692,0.769494313892781,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.368965315629341,0.171567810298526,0.329250856225877,0,0.402115889646523,0.277765335475589,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0.492434012174795,0,0,0,0.16798212819886,0.283550194484773,0.358234090811393,0.581267877027924,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0.411309970813294,0.300343057843917,0,0.336393253036082,0,0.22001485746285,0.646358578788889,0,0,0.531876233169741,0,0,1.41849132023278,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.448340575974109,0.394061520403854,0.646882724578552,1.02674429023799,0.508189248444927,0,0,0.335032530668698,0,0,0,0.828831026872071,0,0,0.271265023699736,0,0,0.315404830067869,0.35142424497814,0,0,0,0,0,0.60818530127658,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0.303127571446259,0,0,0.496215615637554,1.07423381301644,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0,0.177561725313127,0,0,0,0.362578348774867,0,0.644566922551274,0.459257792658427,0,0.131124414959424,0,0.231046011313244,0.784349769176855,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0.512900250232778,0.328014645699706,0,0.515205058238611,1.09883357782012,1.81520899825294,0,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0.275673144969061,0.214840489736547,0.290033387828457,0,0.0890320356467374,0.165284915360978,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,1.06428319221179,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0.320472213382419,0,3.67560323971548,0.371606350251437,0.28853842595289,0.426851060090485,0,0.59873811429845,0.191505370132367,0.423347165447766,0.973865820823666,0,0.228234679033192,0.94007937463814,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0.333698283423817,0.19538809540204,1.11362469558097,0,0,0,0,0.561421621224659,0.146508179271894,2.91265252198832,0.557216921387392,1.13654458722565,0,0,0.307160702099232,0,0.281338832821026,0.333926115068718,0.16480387422676,0.422250816255987,0,0.552567831062295,0,0,0,0,1.97710372524119,1.25314822272926,1.02314474045374,0.394573622547734,0,0,0,0.185536196323703,0,1.04171104434093,0.524759999977174,0,1.365521379426,1.01701460117107,0.236387681767936,0.344743373241465,0.87481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| ||
|short_description=p3@SASS6 | |||
}} | }} |
Latest revision as of 04:07, 25 September 2015
Short description: | p3@SASS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SASS6_5end |
Coexpression cluster: | NA |
Association with transcript: | -130bp_to_ENST00000287482, ENST00000462159, ENST00000539329, NM_194292, uc001dsu.2, uc009wdz.2_5end |
EntrezGene: | SASS6 |
HGNC: | 25403 |
UniProt: | Q6UVJ0B4DYM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.13e-23 | 106 |
cell type cancer | 3.33e-17 | 143 |
cancer | 3.47e-14 | 235 |
disease of cellular proliferation | 1.14e-13 | 239 |
squamous cell carcinoma | 3.21e-10 | 14 |
disease of anatomical entity | 2.14e-07 | 39 |
clear cell adenocarcinoma | 5.18e-07 | 2 |