FFCP PHASE1:Hg19::chr1:218519541..218519558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |EntrezGene=7042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |HGNC=11768 | ||
|TSSclassifier=strong | |||
|UniProt=P61812 | |UniProt=P61812 | ||
|association_with_transcript=-18bp_to_ENST00000366929,ENST00000366930_5end | |association_with_transcript=-18bp_to_ENST00000366929,ENST00000366930_5end | ||
|cluster_id=chr1:218519541..218519558,+ | |||
|coexpression_cluster_id=C927 | |coexpression_cluster_id=C927 | ||
|description=CAGE_peak_14_at_TGFB2_5end | |description=CAGE_peak_14_at_TGFB2_5end | ||
|id=chr1:218519541..218519558,+ | |id=chr1:218519541..218519558,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.91e-08;3!CL:0000067;2.91e-08;3!CL:0005012;2.91e-08;3!CL:0002304;2.91e-08;3!CL:0000632;6.46e-08;3!CL:0002590;6.46e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.99e-08,3;CL:0000067,1.99e-08,3;CL:0005012,1.99e-08,3;CL:0002304,1.99e-08,3;CL:0002590,3.82e-08,3;CL:0000632,8.88e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3350;1.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,4.65e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002200!2.28e-08!11;UBERON:0006876!2.28e-08!11;UBERON:0000475!2.07e-07!365 | |ontology_enrichment_uberon=UBERON:0002200!2.28e-08!11;UBERON:0006876!2.28e-08!11;UBERON:0000475!2.07e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;9.45e-13;4!UBERON:0007625;3.49e-12;11!UBERON:0006876;6.06e-12;11!UBERON:0002203;1.18e-08;6!UBERON:0001768;1.18e-08;6!UBERON:0002200;1.18e-08;6!UBERON:0001778;2.91e-08;3!UBERON:0001775;2.91e-08;3!UBERON:0002294;1.85e-07;7!UBERON:0001173;1.85e-07;7!UBERON:0000019;6.16e-07;19!UBERON:0000047;6.16e-07;19!UBERON:0004088;6.16e-07;19!UBERON:0010230;6.16e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,7.19e-13,4;UBERON:0007625,2.16e-12,11;UBERON:0006876,3.64e-12,11;UBERON:0002203,9.85e-09,6;UBERON:0001768,9.85e-09,6;UBERON:0002200,9.85e-09,6;UBERON:0001778,1.99e-08,3;UBERON:0001775,1.99e-08,3;UBERON:0003914,5.31e-07,117;UBERON:0000119,7.76e-07,309 | |||
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| ||
|short_description=p14@TGFB2 | |short_description=p14@TGFB2 | ||
}} | }} |
Latest revision as of 04:34, 25 September 2015
Short description: | p14@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TGFB2_5end |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | -18bp_to_ENST00000366929, ENST00000366930_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | P61812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.99e-08 | 3 |
ciliated epithelial cell | 1.99e-08 | 3 |
multi-ciliated epithelial cell | 1.99e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.99e-08 | 3 |
smooth muscle cell of the brain vasculature | 3.82e-08 | 3 |
hepatic stellate cell | 8.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 7.19e-13 | 4 |
pigment epithelium of eye | 2.16e-12 | 11 |
vasculature of organ | 3.64e-12 | 11 |
vasculature of eye | 9.85e-09 | 6 |
uvea | 9.85e-09 | 6 |
vasculature of head | 9.85e-09 | 6 |
ciliary epithelium | 1.99e-08 | 3 |
ciliary body | 1.99e-08 | 3 |
epithelial tube | 5.31e-07 | 117 |
cell layer | 7.76e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 4.65e-11 | 2 |