FFCP PHASE1:Hg19::chr16:222868..222869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3039,3040 | |EntrezGene=3039,3040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4823,4824 | |HGNC=4823,4824 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1N2 | |UniProt=G3V1N2 | ||
|association_with_transcript=-19bp_to_ENST00000397806_5end | |association_with_transcript=-19bp_to_ENST00000397806_5end | ||
|cluster_id=chr16:222868..222869,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_HBA1_5end,CAGE_peak_2_at_HBA2_5end | |description=CAGE_peak_2_at_HBA1_5end,CAGE_peak_2_at_HBA2_5end | ||
|id=chr16:222868..222869,+ | |id=chr16:222868..222869,+ | ||
|ontology_enrichment_celltype=CL:0000764!6.12e-23!2;CL:0000765!6.12e-23!2;CL:0000050!6.12e-23!2;CL:0000038!6.12e-23!2;CL:0000558!6.12e-23!2;CL:0000547!6.12e-23!2;CL:0000549!6.12e-23!2;CL:0000550!6.12e-23!2;CL:0000552!6.12e-23!2 | |ontology_enrichment_celltype=CL:0000764!6.12e-23!2;CL:0000765!6.12e-23!2;CL:0000050!6.12e-23!2;CL:0000038!6.12e-23!2;CL:0000558!6.12e-23!2;CL:0000547!6.12e-23!2;CL:0000549!6.12e-23!2;CL:0000550!6.12e-23!2;CL:0000552!6.12e-23!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.42e-10;2!CL:0000558;3.42e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.27e-10,2;CL:0000765,3.27e-10,2;CL:0000050,3.27e-10,2;CL:0000038,3.27e-10,2;CL:0000558,3.27e-10,2;CL:0000547,3.27e-10,2;CL:0000549,3.27e-10,2;CL:0000550,3.27e-10,2;CL:0000552,3.27e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.44e-59!15;UBERON:0000179!1.44e-59!15;UBERON:0000463!1.44e-59!15;UBERON:0007023!4.63e-17!115;UBERON:0000996!2.46e-12!1;UBERON:0002038!3.45e-12!1;UBERON:0009661!3.45e-12!1;UBERON:0002390!1.26e-11!102;UBERON:0003061!1.26e-11!102;UBERON:0002193!1.85e-10!112;UBERON:0004535!3.53e-07!110;UBERON:0004177!4.43e-07!7;UBERON:0001009!5.88e-07!113 | |ontology_enrichment_uberon=UBERON:0000178!1.44e-59!15;UBERON:0000179!1.44e-59!15;UBERON:0000463!1.44e-59!15;UBERON:0007023!4.63e-17!115;UBERON:0000996!2.46e-12!1;UBERON:0002038!3.45e-12!1;UBERON:0009661!3.45e-12!1;UBERON:0002390!1.26e-11!102;UBERON:0003061!1.26e-11!102;UBERON:0002193!1.85e-10!112;UBERON:0004535!3.53e-07!110;UBERON:0004177!4.43e-07!7;UBERON:0001009!5.88e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-96;15!UBERON:0000179;2.34e-96;15!UBERON:0000463;2.34e-96;15!UBERON:0002390;3.42e-41;32!UBERON:0002193;6.64e-23;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.34e-96,15;UBERON:0000179,2.34e-96,15;UBERON:0000463,2.34e-96,15;UBERON:0007023,3.13e-15,114;UBERON:0002390,2.90e-14,98;UBERON:0003061,2.90e-14,98;UBERON:0004535,6.65e-13,109;UBERON:0002193,6.65e-13,108;UBERON:0001009,1.53e-12,112 | |||
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|short_description=p2@HBA1,p2@HBA2 | |short_description=p2@HBA1,p2@HBA2 | ||
}} | }} |
Latest revision as of 04:55, 25 September 2015
Short description: | p2@HBA1, p2@HBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HBA1_5end, CAGE_peak_2_at_HBA2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -19bp_to_ENST00000397806_5end |
EntrezGene: | 3039,3040 |
HGNC: | 4824&submit=Submit 4823, 4824 |
UniProt: | G3V1N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.27e-10 | 2 |
erythroblast | 3.27e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 3.27e-10 | 2 |
erythroid progenitor cell | 3.27e-10 | 2 |
reticulocyte | 3.27e-10 | 2 |
proerythroblast | 3.27e-10 | 2 |
basophilic erythroblast | 3.27e-10 | 2 |
polychromatophilic erythroblast | 3.27e-10 | 2 |
orthochromatic erythroblast | 3.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.34e-96 | 15 |
haemolymphatic fluid | 2.34e-96 | 15 |
organism substance | 2.34e-96 | 15 |
adult organism | 3.13e-15 | 114 |
hematopoietic system | 2.90e-14 | 98 |
blood island | 2.90e-14 | 98 |
cardiovascular system | 6.65e-13 | 109 |
hemolymphoid system | 6.65e-13 | 108 |
circulatory system | 1.53e-12 | 112 |