FFCP PHASE1:Hg19::chr14:68286478..68286514,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:68286478..68286514,+ to FFCP PHASE1:Hg19::chr14:68286478..68286514,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5890 | |EntrezGene=5890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9822 | |HGNC=9822 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAY6,C9JYJ0,O15315 | |UniProt=F8WAY6,C9JYJ0,O15315 | ||
|association_with_transcript=0bp_to_ENST00000479335,ENST00000487861,NM_002877,NM_133509,NM_133510,uc001xkd.2,uc001xke.2,uc001xkf.1,uc001xkg.1,uc010aqq.2,uc010aqr.2,uc010aqs.1_5end | |||
|cluster_id=chr14:68286478..68286514,+ | |||
|description=CAGE_peak_2_at_RAD51B_5end | |||
|id=chr14:68286478..68286514,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.54e-15!53;CL:0000051!1.54e-15!53;CL:0000838!1.73e-15!52;CL:0000037!5.92e-14!172;CL:0000566!5.92e-14!172;CL:0000988!7.58e-14!182;CL:0000738!2.36e-13!140;CL:0002032!1.26e-11!165;CL:0000837!1.26e-11!165;CL:0002031!1.61e-11!124;CL:0002087!2.57e-11!119;CL:0000945!5.42e-10!24;CL:0000826!5.42e-10!24;CL:0000791!9.83e-08!18;CL:0000789!9.83e-08!18;CL:0002420!9.83e-08!18;CL:0002419!9.83e-08!18;CL:0000790!9.83e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.71e-09;24!CL:0000542;4.32e-09;53!CL:0000791;5.82e-08;18!CL:0000789;5.82e-08;18!CL:0002419;5.82e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.53e-16,53;CL:0000051,3.53e-16,53;CL:0000838,4.03e-16,52;CL:0000988,4.92e-15,177;CL:0000037,5.79e-15,168;CL:0000738,6.10e-15,136;CL:0002031,1.71e-12,120;CL:0002032,1.84e-12,161;CL:0000837,1.84e-12,161;CL:0002087,1.92e-12,115;CL:0000945,1.65e-10,24;CL:0000826,1.65e-10,24;CL:0000791,4.11e-08,18;CL:0000789,4.11e-08,18;CL:0002420,4.11e-08,18;CL:0002419,4.11e-08,18;CL:0000790,4.11e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;4.32e-09;53!CL:0000790;5.82e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@RAD51B | |||
}} | }} |
Latest revision as of 05:30, 25 September 2015
Short description: | p2@RAD51B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAD51B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479335, ENST00000487861, NM_002877, NM_133509, NM_133510, uc001xkd.2, uc001xke.2, uc001xkf.1, uc001xkg.1, uc010aqq.2, uc010aqr.2, uc010aqs.1_5end |
EntrezGene: | RAD51B |
HGNC: | 9822 |
UniProt: | F8WAY6C9JYJ0O15315 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.53e-16 | 53 |
common lymphoid progenitor | 3.53e-16 | 53 |
lymphoid lineage restricted progenitor cell | 4.03e-16 | 52 |
hematopoietic cell | 4.92e-15 | 177 |
hematopoietic stem cell | 5.79e-15 | 168 |
leukocyte | 6.10e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.71e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.84e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-12 | 161 |
nongranular leukocyte | 1.92e-12 | 115 |
lymphocyte of B lineage | 1.65e-10 | 24 |
pro-B cell | 1.65e-10 | 24 |
mature alpha-beta T cell | 4.11e-08 | 18 |
alpha-beta T cell | 4.11e-08 | 18 |
immature T cell | 4.11e-08 | 18 |
mature T cell | 4.11e-08 | 18 |
immature alpha-beta T cell | 4.11e-08 | 18 |