FFCP PHASE1:Hg19::chr22:46692848..46692865,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51512 | |EntrezGene=51512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13698 | |HGNC=13698 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYZ3 | |UniProt=Q9NYZ3 | ||
|association_with_transcript=-419bp_to_AF223408_5end | |association_with_transcript=-419bp_to_AF223408_5end | ||
|cluster_id=chr22:46692848..46692865,+ | |||
|description=CAGE_peak_2_at_GTSE1_5end | |description=CAGE_peak_2_at_GTSE1_5end | ||
|id=chr22:46692848..46692865,+ | |id=chr22:46692848..46692865,+ | ||
|ontology_enrichment_celltype=CL:0000548!4.98e-11!679;CL:0000004!4.98e-11!679;CL:0000255!4.98e-11!679;CL:0000012!1.70e-10!682;CL:0000133!4.05e-09!59;CL:0002321!1.97e-08!248;CL:0000066!3.99e-08!254;CL:0000220!7.35e-08!246;CL:0002319!1.61e-07!25;CL:0000055!1.95e-07!180;CL:0000333!2.19e-07!41;CL:0000221!5.83e-07!71 | |ontology_enrichment_celltype=CL:0000548!4.98e-11!679;CL:0000004!4.98e-11!679;CL:0000255!4.98e-11!679;CL:0000012!1.70e-10!682;CL:0000133!4.05e-09!59;CL:0002321!1.97e-08!248;CL:0000066!3.99e-08!254;CL:0000220!7.35e-08!246;CL:0002319!1.61e-07!25;CL:0000055!1.95e-07!180;CL:0000333!2.19e-07!41;CL:0000221!5.83e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002321;3.90e-09;15!CL:0000095;2.26e-08;17!CL:0000128;3.77e-08;7!CL:0000126;3.77e-08;7!CL:0000127;3.77e-08;7!CL:0002322;5.09e-08;5!CL:0002681;1.54e-07;12!CL:0002584;1.54e-07;12!CL:1000497;1.80e-07;17!CL:0002518;1.80e-07;17!CL:0002319;3.17e-07;25!CL:1000449;3.84e-07;15!CL:1000507;4.65e-07;10!CL:1000494;4.65e-07;10 | |ontology_enrichment_celltype_v019=CL:0002321;3.90e-09;15!CL:0000095;2.26e-08;17!CL:0000128;3.77e-08;7!CL:0000126;3.77e-08;7!CL:0000127;3.77e-08;7!CL:0002322;5.09e-08;5!CL:0002681;1.54e-07;12!CL:0002584;1.54e-07;12!CL:1000497;1.80e-07;17!CL:0002518;1.80e-07;17!CL:0002319;3.17e-07;25!CL:1000449;3.84e-07;15!CL:1000507;4.65e-07;10!CL:1000494;4.65e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.03e-11,41;CL:0000133,3.85e-09,59;CL:0000095,1.06e-08,17;CL:0000123,1.06e-08,17;CL:0002322,2.40e-08,5;CL:0000128,2.78e-08,7;CL:0000126,2.78e-08,7;CL:0000127,2.78e-08,7;CL:0002453,2.78e-08,7;CL:0002319,1.43e-07,25;CL:0002681,2.27e-07,12;CL:0002584,2.27e-07,12;CL:1000497,2.81e-07,17;CL:0002518,2.81e-07,17;CL:1000507,3.67e-07,10;CL:1000494,3.67e-07,10;CL:1000449,4.67e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!6.10e-19!235;DOID:14566!4.71e-18!239;DOID:0050687!3.97e-10!143;DOID:0050686!1.88e-08!137;DOID:305!3.88e-08!106;DOID:2531!4.82e-08!51;DOID:0060083!4.82e-08!51 | |ontology_enrichment_disease=DOID:162!6.10e-19!235;DOID:14566!4.71e-18!239;DOID:0050687!3.97e-10!143;DOID:0050686!1.88e-08!137;DOID:305!3.88e-08!106;DOID:2531!4.82e-08!51;DOID:0060083!4.82e-08!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.78e-08;24!UBERON:0011143;2.78e-08;24!UBERON:0001225;1.54e-07;12!UBERON:0008987;1.54e-07;12!UBERON:0000489;2.15e-07;29!UBERON:0001851;3.84e-07;15!UBERON:0006555;3.84e-07;15!UBERON:0004819;3.84e-07;15!UBERON:0001285;3.84e-07;15!UBERON:0007684;3.84e-07;15!UBERON:0004211;4.65e-07;10!UBERON:0009773;4.65e-07;10!UBERON:0001231;4.65e-07;10!UBERON:0004810;4.65e-07;10!UBERON:0006554;4.92e-07;30!UBERON:0001008;4.92e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0002113;2.78e-08;24!UBERON:0011143;2.78e-08;24!UBERON:0001225;1.54e-07;12!UBERON:0008987;1.54e-07;12!UBERON:0000489;2.15e-07;29!UBERON:0001851;3.84e-07;15!UBERON:0006555;3.84e-07;15!UBERON:0004819;3.84e-07;15!UBERON:0001285;3.84e-07;15!UBERON:0007684;3.84e-07;15!UBERON:0004211;4.65e-07;10!UBERON:0009773;4.65e-07;10!UBERON:0001231;4.65e-07;10!UBERON:0004810;4.65e-07;10!UBERON:0006554;4.92e-07;30!UBERON:0001008;4.92e-07;30 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.03e-07,26;UBERON:0003918,2.03e-07,26;UBERON:0011143,2.03e-07,26;UBERON:0005095,2.03e-07,26;UBERON:0007687,2.03e-07,26;UBERON:0001225,2.27e-07,12;UBERON:0008987,2.27e-07,12;UBERON:0004810,3.67e-07,10;UBERON:0001851,3.92e-07,15;UBERON:0004211,4.67e-07,15;UBERON:0009773,4.67e-07,15;UBERON:0001231,4.67e-07,15;UBERON:0001285,4.67e-07,15;UBERON:0007684,4.67e-07,15;UBERON:0004208,4.67e-07,15 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.491467873003018,0,2.83973783769224,2.11013582582763,0.495065411840187,0,0,0,0,0,2.83178433576612,2.24400760368678,0,3.43483184557268,1.77936752594749,1.25542639594803,0.0764134057479513,0.246301768349837,0.629686250509434,0,0,0.154816123316076,0,0,0,1.08454080812422,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.493313713811028,0,0.869409257205157,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,1.80719576192283,0,0.289693037921647,1.5905718941022,0,1.51255707462509,0.665188192387692,0.966182642624386,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.993812036833525,0,0.694281003215189,0.56530794192401,0,0.550236083880135,0.835979866147242,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,1.3394959242612,2.69435247151404,1.0135033243499,1.53316637465883,0,0.366403487860815,0,0,0,0,0.759783069987479,0,0.286836620748814,1.77334191099179,0,0,0,0.311211035399766,0.404132016209064,2.12500474047496,0.756787138224657,0,2.10889288650417,0,0.570471821544449,0.149448680551801,0.704606991862589,1.61872944368132,1.26405726032024,0.816616685019573,1.84251475967652,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0.673344455816265,1.62654075833553,0.277064115484183,0.438977620880838,0.30648779579902,0,1.58805056424029,0.179389635688862,0.213557388818567,0.211931901159562,0.900273288253207,0.412210116953756,0.257640540045629,0.18611685633159,0.506328996723799,0.487185025805993,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.604512589365842,0.847802961552438,0.193260853163297,0,0,1.70763188581434,2.25300606146525,1.2781333715647,2.38420426535352,1.51392510525377,1.45990943630332,1.56449532329816,0,2.76269842704961,0,0,1.0647612003586,0.842923450390509,0.964044119533928,0.661763836394364,0.435758888184812,0.474541238222193,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0.514703430895577,0,0,0,0.185176890317059,0.325808305310325,0,0,0.695582429850461,0,0.144366447761074,1.38895653772983,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.766765358330422,0,0.352193736052904,0,0,0,0.380987365753014,0.381988425558278,0,0,0.205654985406647,1.50171528921959,0,2.01835951821649,0.43596006883328,1.24675085895615,0,0,0,0.26593811658487,1.04007436911366,2.31486636835928,4.25547396069835,2.39779961114489,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0,0.410952645100767,0.358121926479791,0.784596007954691,0.197030760201927,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,0.521301686808497,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,2.41912234663744,0,0,0,0,0,0,0,0.771048469013278,0,0.657017248110473,0,0.348631135379878,0,0,0,1.03333003348146,0.546273504020151,0,2.25599806453706,0.847168708148562,0,1.46139224653261,0.422206515571503,2.27466768141793,1.02056223165909,0.863663664408557,0,1.62567862526312,1.00337954770971,2.03901018436031,1.66215201785745,2.46262230194396,1.09629938322967,1.5686127061494,0.769350375349168,1.31205858279882,0,0.103041011647722,0.915694648183434,0.577566499444116,0.574265537996172,0,1.6068392984416,0.193341436584244,0.770243085573222,0.460511024178389,0.964856007391714,0.429680979473094,0.435050081742686,0.681813019328807,0.445160178233687,0,0,0.638063562472921,0,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0.632758849437452,0.38126038784765,0.767693373934002,0,0.318203247925937,0.78494864019923,0,0.823611089208164,1.17812402345686,0.202182481573316,0,0.421258456238981,1.46290121726877,0,1.05650146756755,0.9554993798559,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,1.14729081763241,0.0982490410131212,0,0.709522128141196,0,0,3.41525856389144,2.79947776195986,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,3.09789806269672,0,1.22520107990516,1.11481905075431,1.00988449083511,3.48595032407229,1.75368900001705,1.1974762285969,0.383010740264733,0.635020748171649,0,0.561594356226918,0.684704037099577,0.313359791546046,0,0.338583555603207,0.481764225311099,0.605399121573143,0.425846237690326,0,0.614481528616916,1.11838053946208,0.834245708559542,0.781552381608161,0,3.69262196843137,0.540911356951966,1.6653598399891,1.4098700508785,2.05854594449042,0.146508179271894,0.242721043499027,0.445773537109913,0.852408440419239,0,0.593929361665277,0,0,0,0,0.494411622680279,1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|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.491467873003018,0,2.83973783769224,2.11013582582763,0.495065411840187,0,0,0,0,0,2.83178433576612,2.24400760368678,0,3.43483184557268,1.77936752594749,1.25542639594803,0.0764134057479513,0.246301768349837,0.629686250509434,0,0,0.154816123316076,0,0,0,1.08454080812422,1.27952309238679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.493313713811028,0,0.869409257205157,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,1.80719576192283,0,0.289693037921647,1.5905718941022,0,1.51255707462509,0.665188192387692,0.966182642624386,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.993812036833525,0,0.694281003215189,0.56530794192401,0,0.550236083880135,0.835979866147242,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,1.3394959242612,2.69435247151404,1.0135033243499,1.53316637465883,0,0.366403487860815,0,0,0,0,0.759783069987479,0,0.286836620748814,1.77334191099179,0,0,0,0.311211035399766,0.404132016209064,2.12500474047496,0.756787138224657,0,2.10889288650417,0,0.570471821544449,0.149448680551801,0.704606991862589,1.61872944368132,1.26405726032024,0.816616685019573,1.84251475967652,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0.673344455816265,1.62654075833553,0.277064115484183,0.438977620880838,0.30648779579902,0,1.58805056424029,0.179389635688862,0.213557388818567,0.211931901159562,0.900273288253207,0.412210116953756,0.257640540045629,0.18611685633159,0.506328996723799,0.487185025805993,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.604512589365842,0.847802961552438,0.193260853163297,0,0,1.70763188581434,2.25300606146525,1.2781333715647,2.38420426535352,1.51392510525377,1.45990943630332,1.56449532329816,0,2.76269842704961,0,0,1.0647612003586,0.842923450390509,0.964044119533928,0.661763836394364,0.435758888184812,0.474541238222193,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0.514703430895577,0,0,0,0.185176890317059,0.325808305310325,0,0,0.695582429850461,0,0.144366447761074,1.38895653772983,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.766765358330422,0,0.352193736052904,0,0,0,0.380987365753014,0.381988425558278,0,0,0.205654985406647,1.50171528921959,0,2.01835951821649,0.43596006883328,1.24675085895615,0,0,0,0.26593811658487,1.04007436911366,2.31486636835928,4.25547396069835,2.39779961114489,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0,0.410952645100767,0.358121926479791,0.784596007954691,0.197030760201927,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0.664225598535437,0.368738337083406,0.521301686808497,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,2.41912234663744,0,0,0,0,0,0,0,0.771048469013278,0,0.657017248110473,0,0.348631135379878,0,0,0,1.03333003348146,0.546273504020151,0,2.25599806453706,0.847168708148562,0,1.46139224653261,0.422206515571503,2.27466768141793,1.02056223165909,0.863663664408557,0,1.62567862526312,1.00337954770971,2.03901018436031,1.66215201785745,2.46262230194396,1.09629938322967,1.5686127061494,0.769350375349168,1.31205858279882,0,0.103041011647722,0.915694648183434,0.577566499444116,0.574265537996172,0,1.6068392984416,0.193341436584244,0.770243085573222,0.460511024178389,0.964856007391714,0.429680979473094,0.435050081742686,0.681813019328807,0.445160178233687,0,0,0.638063562472921,0,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0.632758849437452,0.38126038784765,0.767693373934002,0,0.318203247925937,0.78494864019923,0,0.823611089208164,1.17812402345686,0.202182481573316,0,0.421258456238981,1.46290121726877,0,1.05650146756755,0.9554993798559,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,1.14729081763241,0.0982490410131212,0,0.709522128141196,0,0,3.41525856389144,2.79947776195986,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,3.09789806269672,0,1.22520107990516,1.11481905075431,1.00988449083511,3.48595032407229,1.75368900001705,1.1974762285969,0.383010740264733,0.635020748171649,0,0.561594356226918,0.684704037099577,0.313359791546046,0,0.338583555603207,0.481764225311099,0.605399121573143,0.425846237690326,0,0.614481528616916,1.11838053946208,0.834245708559542,0.781552381608161,0,3.69262196843137,0.540911356951966,1.6653598399891,1.4098700508785,2.05854594449042,0.146508179271894,0.242721043499027,0.445773537109913,0.852408440419239,0,0.593929361665277,0,0,0,0,0.494411622680279,1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| ||
|short_description=p2@GTSE1 | |short_description=p2@GTSE1 | ||
}} | }} |
Latest revision as of 05:35, 25 September 2015
Short description: | p2@GTSE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GTSE1_5end |
Coexpression cluster: | NA |
Association with transcript: | -419bp_to_AF223408_5end |
EntrezGene: | GTSE1 |
HGNC: | 13698 |
UniProt: | Q9NYZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.03e-11 | 41 |
neurectodermal cell | 3.85e-09 | 59 |
neuron associated cell | 1.06e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.06e-08 | 17 |
embryonic stem cell | 2.40e-08 | 5 |
oligodendrocyte | 2.78e-08 | 7 |
macroglial cell | 2.78e-08 | 7 |
astrocyte | 2.78e-08 | 7 |
oligodendrocyte precursor cell | 2.78e-08 | 7 |
neural cell | 1.43e-07 | 25 |
kidney cortical cell | 2.27e-07 | 12 |
renal cortical epithelial cell | 2.27e-07 | 12 |
kidney cell | 2.81e-07 | 17 |
kidney epithelial cell | 2.81e-07 | 17 |
kidney tubule cell | 3.67e-07 | 10 |
nephron tubule epithelial cell | 3.67e-07 | 10 |
epithelial cell of nephron | 4.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.03e-07 | 26 |
kidney mesenchyme | 2.03e-07 | 26 |
upper urinary tract | 2.03e-07 | 26 |
kidney rudiment | 2.03e-07 | 26 |
kidney field | 2.03e-07 | 26 |
cortex of kidney | 2.27e-07 | 12 |
renal parenchyma | 2.27e-07 | 12 |
nephron tubule epithelium | 3.67e-07 | 10 |
cortex | 3.92e-07 | 15 |
nephron epithelium | 4.67e-07 | 15 |
renal tubule | 4.67e-07 | 15 |
nephron tubule | 4.67e-07 | 15 |
nephron | 4.67e-07 | 15 |
uriniferous tubule | 4.67e-07 | 15 |
nephrogenic mesenchyme | 4.67e-07 | 15 |