FFCP PHASE1:Hg19::chr16:23194058..23194081,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:23194058..23194081,+ to FFCP PHASE1:Hg19::chr16:23194058..23194081,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6340 | |EntrezGene=6340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10602 | |HGNC=10602 | ||
|TSSclassifier=strong | |||
|UniProt=A5X2V1,P51170 | |UniProt=A5X2V1,P51170 | ||
|association_with_transcript=18bp_to_NM_001039,uc002dlm.1_5end | |||
|cluster_id=chr16:23194058..23194081,+ | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_1_at_SCNN1G_5end | |||
|id=chr16:23194058..23194081,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.75e-08;5!CL:0002623;9.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.93e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.89e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;3.60e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.45e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-18!115;UBERON:0000924!1.16e-15!173;UBERON:0006601!1.16e-15!173;UBERON:0004121!1.96e-13!169;UBERON:0000073!1.54e-09!94;UBERON:0001016!1.54e-09!94;UBERON:0001017!3.02e-09!82;UBERON:0001049!3.60e-09!57;UBERON:0005068!3.60e-09!57;UBERON:0006241!3.60e-09!57;UBERON:0007135!3.60e-09!57;UBERON:0000468!6.07e-09!659;UBERON:0000153!6.66e-09!129;UBERON:0007811!6.66e-09!129;UBERON:0000161!7.68e-09!35;UBERON:0005743!8.52e-09!86;UBERON:0000922!1.90e-08!612;UBERON:0000166!4.98e-08!21;UBERON:0002619!6.29e-08!22;UBERON:0002616!6.51e-08!59;UBERON:0001044!6.95e-08!6;UBERON:0003293!6.95e-08!6;UBERON:0003294!6.95e-08!6;UBERON:0010047!6.95e-08!6;UBERON:0000167!6.95e-08!6;UBERON:0000033!1.42e-07!123;UBERON:0002346!2.59e-07!90;UBERON:0003408!3.74e-07!10;UBERON:0000955!4.93e-07!69;UBERON:0006238!4.93e-07!69;UBERON:0003080!5.44e-07!42;UBERON:0004175!7.19e-07!25;UBERON:0001950!8.79e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.12e-12;49!UBERON:0001044;2.80e-12;6!UBERON:0003293;2.80e-12;6!UBERON:0003294;2.80e-12;6!UBERON:0010047;2.80e-12;6!UBERON:0003408;2.80e-12;6!UBERON:0000167;2.80e-12;6!UBERON:0002050;1.18e-10;5!UBERON:0005423;1.18e-10;5!UBERON:0002346;8.80e-09;4!UBERON:0000923;8.80e-09;4!UBERON:0010316;8.80e-09;4!UBERON:0005291;8.80e-09;4!UBERON:0001041;2.44e-08;14!UBERON:0004175;5.50e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.19e-12,6;UBERON:0003293,3.19e-12,6;UBERON:0003294,3.19e-12,6;UBERON:0010047,3.19e-12,6;UBERON:0000167,3.19e-12,6;UBERON:0003408,1.19e-11,10;UBERON:0007023,3.10e-09,114;UBERON:0002530,7.33e-09,59;UBERON:0000161,4.31e-07,36 | |||
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| ||
|short_description=p1@SCNN1G | |||
}} | }} |
Latest revision as of 06:02, 25 September 2015
Short description: | p1@SCNN1G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCNN1G_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 18bp_to_NM_001039, uc002dlm.1_5end |
EntrezGene: | SCNN1G |
HGNC: | 10602 |
UniProt: | A5X2V1P51170 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.93e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.19e-12 | 6 |
gland of oral region | 3.19e-12 | 6 |
gland of foregut | 3.19e-12 | 6 |
oral gland | 3.19e-12 | 6 |
oral cavity | 3.19e-12 | 6 |
gland of gut | 1.19e-11 | 10 |
adult organism | 3.10e-09 | 114 |
gland | 7.33e-09 | 59 |
orifice | 4.31e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.45e-07 | 10 |