FFCP PHASE1:Hg19::chr16:23313645..23313671,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:23313645..23313671,+
|short_description=p1@SCNN1B
|description=CAGE_peak_1_at_SCNN1B_5end
|association_with_transcript=54bp_to_ENST00000343070,NM_000336,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6338 | |EntrezGene=6338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10600 | |HGNC=10600 | ||
|TSSclassifier=strong | |||
|UniProt=P51168,B2R812 | |UniProt=P51168,B2R812 | ||
|association_with_transcript=54bp_to_ENST00000343070,NM_000336,uc002dln.2_5end | |||
|cluster_id=chr16:23313645..23313671,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_1_at_SCNN1B_5end | |||
|id=chr16:23313645..23313671,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.69e-07;3!CL:0000622;4.50e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.49e-07,3;CL:0000622,3.37e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.73e-07;86!UBERON:0004872;3.86e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.54e-18!115;UBERON:0000464!1.75e-09!104;UBERON:0001004!1.40e-08!72;UBERON:0001044!1.76e-08!6;UBERON:0003293!1.76e-08!6;UBERON:0003294!1.76e-08!6;UBERON:0010047!1.76e-08!6;UBERON:0000167!1.76e-08!6;UBERON:0002465!6.09e-08!10;UBERON:0003408!2.00e-07!10;UBERON:0004119!2.32e-07!169;UBERON:0000925!2.32e-07!169;UBERON:0006595!2.32e-07!169;UBERON:0000065!4.60e-07!53;UBERON:0004921!5.51e-07!129;UBERON:0004185!5.51e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.11e-13;6!UBERON:0003293;2.11e-13;6!UBERON:0003294;2.11e-13;6!UBERON:0010047;2.11e-13;6!UBERON:0003408;2.11e-13;6!UBERON:0000167;2.11e-13;6!UBERON:0004921;8.29e-10;33!UBERON:0001041;2.45e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.09e-20,114;UBERON:0001044,1.84e-13,6;UBERON:0003293,1.84e-13,6;UBERON:0003294,1.84e-13,6;UBERON:0010047,1.84e-13,6;UBERON:0000167,1.84e-13,6;UBERON:0004119,6.79e-12,160;UBERON:0000925,6.79e-12,160;UBERON:0006595,6.79e-12,160;UBERON:0004921,9.91e-12,118;UBERON:0001007,7.39e-11,145;UBERON:0001555,7.39e-11,145;UBERON:0007026,7.39e-11,145;UBERON:0003408,5.47e-10,10;UBERON:0000161,1.94e-08,36;UBERON:0001004,7.72e-08,74;UBERON:0001041,1.44e-07,87 | |||
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| ||
|short_description=p1@SCNN1B | |||
}} | }} |
Latest revision as of 06:04, 25 September 2015
Short description: | p1@SCNN1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCNN1B_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 54bp_to_ENST00000343070, NM_000336, uc002dln.2_5end |
EntrezGene: | SCNN1B |
HGNC: | 10600 |
UniProt: | P51168B2R812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.49e-07 | 3 |
acinar cell | 3.37e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.09e-20 | 114 |
saliva-secreting gland | 1.84e-13 | 6 |
gland of oral region | 1.84e-13 | 6 |
gland of foregut | 1.84e-13 | 6 |
oral gland | 1.84e-13 | 6 |
oral cavity | 1.84e-13 | 6 |
endoderm-derived structure | 6.79e-12 | 160 |
endoderm | 6.79e-12 | 160 |
presumptive endoderm | 6.79e-12 | 160 |
subdivision of digestive tract | 9.91e-12 | 118 |
digestive system | 7.39e-11 | 145 |
digestive tract | 7.39e-11 | 145 |
primitive gut | 7.39e-11 | 145 |
gland of gut | 5.47e-10 | 10 |
orifice | 1.94e-08 | 36 |
respiratory system | 7.72e-08 | 74 |
foregut | 1.44e-07 | 87 |