FFCP PHASE1:Hg19::chr5:142435323..142435334,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23092 | |EntrezGene=23092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17073 | |HGNC=17073 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-313bp_to_ENST00000443045_5end | |association_with_transcript=-313bp_to_ENST00000443045_5end | ||
|cluster_id=chr5:142435323..142435334,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_27_at_ARHGAP26_5end | |description=CAGE_peak_27_at_ARHGAP26_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.00e-15!24;CL:0000826!1.00e-15!24;CL:0000838!1.66e-12!52;CL:0000542!3.12e-12!53;CL:0000051!3.12e-12!53;CL:0000946!1.42e-07!1;CL:0000786!1.42e-07!1;CL:0000980!1.42e-07!1;CL:0000738!7.02e-07!140 | |ontology_enrichment_celltype=CL:0000945!1.00e-15!24;CL:0000826!1.00e-15!24;CL:0000838!1.66e-12!52;CL:0000542!3.12e-12!53;CL:0000051!3.12e-12!53;CL:0000946!1.42e-07!1;CL:0000786!1.42e-07!1;CL:0000980!1.42e-07!1;CL:0000738!7.02e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.78e-27;24!CL:0000542;2.70e-07;53 | |ontology_enrichment_celltype_v019=CL:0000945;6.78e-27;24!CL:0000542;2.70e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.78e-27,24;CL:0000826,6.78e-27,24;CL:0000838,7.71e-13,52;CL:0000542,1.31e-12,53;CL:0000051,1.31e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000051;2.70e-07;53!UBERON:0004872;5.08e-07;7 | |ontology_enrichment_development_v019=CL:0000051;2.70e-07;53!UBERON:0004872;5.08e-07;7 | ||
|ontology_enrichment_disease=DOID:630!9.10e-08!1;DOID:0050177!9.10e-08!1;DOID:0050427!9.10e-08!1;DOID:4960!1.10e-07!1;DOID:0070004!1.10e-07!1;DOID:2513!1.25e-07!1;DOID:0060060!2.07e-07!1;DOID:0060061!2.07e-07!1;DOID:8691!2.07e-07!1;DOID:2355!3.20e-07!1 | |ontology_enrichment_disease=DOID:630!9.10e-08!1;DOID:0050177!9.10e-08!1;DOID:0050427!9.10e-08!1;DOID:4960!1.10e-07!1;DOID:0070004!1.10e-07!1;DOID:2513!1.25e-07!1;DOID:0060060!2.07e-07!1;DOID:0060061!2.07e-07!1;DOID:8691!2.07e-07!1;DOID:2355!3.20e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!2.32e-09!6;UBERON:0001869!8.38e-08!32;UBERON:0001893!2.60e-07!34;UBERON:0002902!3.40e-07!1;UBERON:0009899!3.40e-07!1;UBERON:0007190!3.84e-07!1;UBERON:0002581!4.09e-07!1;UBERON:0001882!4.34e-07!1;UBERON:0005403!4.34e-07!1;UBERON:0002022!4.90e-07!1;UBERON:0001950!9.34e-07!20 | |ontology_enrichment_uberon=UBERON:0000200!2.32e-09!6;UBERON:0001869!8.38e-08!32;UBERON:0001893!2.60e-07!34;UBERON:0002902!3.40e-07!1;UBERON:0009899!3.40e-07!1;UBERON:0007190!3.84e-07!1;UBERON:0002581!4.09e-07!1;UBERON:0001882!4.34e-07!1;UBERON:0005403!4.34e-07!1;UBERON:0002022!4.90e-07!1;UBERON:0001950!9.34e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
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|short_description=p27@ARHGAP26 | |short_description=p27@ARHGAP26 | ||
}} | }} |
Latest revision as of 07:39, 25 September 2015
Short description: | p27@ARHGAP26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_ARHGAP26_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -313bp_to_ENST00000443045_5end |
EntrezGene: | ARHGAP26 |
HGNC: | 17073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.78e-27 | 24 |
pro-B cell | 6.78e-27 | 24 |
lymphoid lineage restricted progenitor cell | 7.71e-13 | 52 |
lymphocyte | 1.31e-12 | 53 |
common lymphoid progenitor | 1.31e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |