FFCP PHASE1:Mm9::chr8:46347356..46347363,-: Difference between revisions
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{{FFCP|EntrezGene=109821|HGNC=|MCL_coexpression_id=96|UniProt=Q91Y47|association_with_transcript=21bp_to_ENSMUST00000034064,NM_028066,uc009los.1_5end|description=CAGE_peak_4_at_F11_5end|id=chr8:46347356..46347363,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.53e-28!22;UBERON:0007499!7.53e-28!22;UBERON:0006925!7.53e-28!22;UBERON:0009497!7.53e-28!22;UBERON:0000015!7.53e-28!22;UBERON:0002423!7.53e-28!22;UBERON:0006235!7.53e-28!22;UBERON:0008835!7.53e-28!22;UBERON:0003894!7.53e-28!22;UBERON:0004161!7.53e-28!22;UBERON:0008836!7.53e-28!22;UBERON:0009854!2.29e-26!23;UBERON:0009856!2.29e-26!23;UBERON:0002365!9.24e-24!25;UBERON:0002330!9.24e-24!25;UBERON:0005256!1.89e-13!47;UBERON:0005172!1.24e-12!49;UBERON:0005173!1.24e-12!49;UBERON:0002417!1.24e-12!49;UBERON:0000916!1.24e-12!49;UBERON:0003914!6.94e-10!47;UBERON:0002368!3.75e-09!60;UBERON:0005057!1.11e-08!51;UBERON:0002530!5.57e-08!65;UBERON:0009569!9.07e-08!66;UBERON:0003929!1.16e-07!55;UBERON:0000949!2.30e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.13e-30,22;UBERON:0007499,7.13e-30,22;UBERON:0006925,7.13e-30,22;UBERON:0009497,7.13e-30,22;UBERON:0000015,7.13e-30,22;UBERON:0002423,7.13e-30,22;UBERON:0006235,7.13e-30,22;UBERON:0008835,7.13e-30,22;UBERON:0003894,7.13e-30,22;UBERON:0004161,7.13e-30,22;UBERON:0008836,7.13e-30,22;UBERON:0009854,1.69e-28,23;UBERON:0009856,1.69e-28,23;UBERON:0002365,4.47e-26,25;UBERON:0002330,4.47e-26,25;UBERON:0005256,1.14e-13,45;UBERON:0003914,5.25e-13,47;UBERON:0005172,2.13e-12,49;UBERON:0005173,2.13e-12,49;UBERON:0002417,2.13e-12,49;UBERON:0000916,2.13e-12,49;UBERON:0003929,7.75e-11,55;UBERON:0002368,8.97e-10,60;UBERON:0003104,1.40e-09,61;UBERON:0009142,1.40e-09,61;UBERON:0002530,7.13e-09,65;UBERON:0000490,1.04e-08,66;UBERON:0009569,1.04e-08,66;UBERON:0005911,3.02e-08,69;UBERON:0000949,8.03e-08,72;UBERON:0005631,3.89e-07,3;UBERON:0000478,3.89e-07,3;UBERON:0000158,3.89e-07,3;UBERON:0005177,5.90e-07,79;UBERON:0001041,7.63e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,3.2382191498269,1.29955283489534,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0.691846491768175,0.301445281105245,0.352766121407114,0,2.71914464507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.166845105716094,0.393117990226406,0.674586337154561,0.811440485554012,4.58236603529592,5.34714288740982,4.89083433666378,6.32327384422638,5.49122826376163,7.18841032636773,9.67566463938109,6.24075346229121,2.77836765741823,3.76734568396016,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81297727554876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661227645802687,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0.962757628775446,0.758091635291392,1.01391719956096,0.188626341386076,0.37456602987953,0.320125762024346,0.631790158511746,1.42888107384922,0.463537303779422,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0.263069711437843,0.950628796921032,0,1.18635018124174,0.394017929502254,1.22769312950907,0.464810523557898,0.964533054905707,0,1.16965804222704,0.214871054048298,0,0,0|short_description=p4@F11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109821 | |||
|HGNC= | |||
|MCL_coexpression_id=96 | |||
|TSSclassifier=NA | |||
|UniProt=Q91Y47 | |||
|association_with_transcript=21bp_to_ENSMUST00000034064,NM_028066,uc009los.1_5end | |||
|cluster_id=chr8:46347356..46347363,- | |||
|description=CAGE_peak_4_at_F11_5end | |||
|id=chr8:46347356..46347363,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.53e-28!22;UBERON:0007499!7.53e-28!22;UBERON:0006925!7.53e-28!22;UBERON:0009497!7.53e-28!22;UBERON:0000015!7.53e-28!22;UBERON:0002423!7.53e-28!22;UBERON:0006235!7.53e-28!22;UBERON:0008835!7.53e-28!22;UBERON:0003894!7.53e-28!22;UBERON:0004161!7.53e-28!22;UBERON:0008836!7.53e-28!22;UBERON:0009854!2.29e-26!23;UBERON:0009856!2.29e-26!23;UBERON:0002365!9.24e-24!25;UBERON:0002330!9.24e-24!25;UBERON:0005256!1.89e-13!47;UBERON:0005172!1.24e-12!49;UBERON:0005173!1.24e-12!49;UBERON:0002417!1.24e-12!49;UBERON:0000916!1.24e-12!49;UBERON:0003914!6.94e-10!47;UBERON:0002368!3.75e-09!60;UBERON:0005057!1.11e-08!51;UBERON:0002530!5.57e-08!65;UBERON:0009569!9.07e-08!66;UBERON:0003929!1.16e-07!55;UBERON:0000949!2.30e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.13e-30,22;UBERON:0007499,7.13e-30,22;UBERON:0006925,7.13e-30,22;UBERON:0009497,7.13e-30,22;UBERON:0000015,7.13e-30,22;UBERON:0002423,7.13e-30,22;UBERON:0006235,7.13e-30,22;UBERON:0008835,7.13e-30,22;UBERON:0003894,7.13e-30,22;UBERON:0004161,7.13e-30,22;UBERON:0008836,7.13e-30,22;UBERON:0009854,1.69e-28,23;UBERON:0009856,1.69e-28,23;UBERON:0002365,4.47e-26,25;UBERON:0002330,4.47e-26,25;UBERON:0005256,1.14e-13,45;UBERON:0003914,5.25e-13,47;UBERON:0005172,2.13e-12,49;UBERON:0005173,2.13e-12,49;UBERON:0002417,2.13e-12,49;UBERON:0000916,2.13e-12,49;UBERON:0003929,7.75e-11,55;UBERON:0002368,8.97e-10,60;UBERON:0003104,1.40e-09,61;UBERON:0009142,1.40e-09,61;UBERON:0002530,7.13e-09,65;UBERON:0000490,1.04e-08,66;UBERON:0009569,1.04e-08,66;UBERON:0005911,3.02e-08,69;UBERON:0000949,8.03e-08,72;UBERON:0005631,3.89e-07,3;UBERON:0000478,3.89e-07,3;UBERON:0000158,3.89e-07,3;UBERON:0005177,5.90e-07,79;UBERON:0001041,7.63e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,3.2382191498269,1.29955283489534,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0.691846491768175,0.301445281105245,0.352766121407114,0,2.71914464507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.166845105716094,0.393117990226406,0.674586337154561,0.811440485554012,4.58236603529592,5.34714288740982,4.89083433666378,6.32327384422638,5.49122826376163,7.18841032636773,9.67566463938109,6.24075346229121,2.77836765741823,3.76734568396016,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81297727554876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661227645802687,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0.962757628775446,0.758091635291392,1.01391719956096,0.188626341386076,0.37456602987953,0.320125762024346,0.631790158511746,1.42888107384922,0.463537303779422,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0.263069711437843,0.950628796921032,0,1.18635018124174,0.394017929502254,1.22769312950907,0.464810523557898,0.964533054905707,0,1.16965804222704,0.214871054048298,0,0,0 | |||
|short_description=p4@F11 | |||
}} |
Latest revision as of 13:51, 25 September 2015
Short description: | p4@F11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_F11_5end |
Coexpression cluster: | MCL_coexpression_mm9:96 |
Association with transcript: | 21bp_to_ENSMUST00000034064, NM_028066, uc009los.1_5end |
EntrezGene: | F11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 7.13e-30 | 22 |
epithelial sac | 7.13e-30 | 22 |
digestive gland | 7.13e-30 | 22 |
epithelium of foregut-midgut junction | 7.13e-30 | 22 |
anatomical boundary | 7.13e-30 | 22 |
hepatobiliary system | 7.13e-30 | 22 |
foregut-midgut junction | 7.13e-30 | 22 |
hepatic diverticulum | 7.13e-30 | 22 |
liver primordium | 7.13e-30 | 22 |
septum transversum | 7.13e-30 | 22 |
liver bud | 7.13e-30 | 22 |
digestive tract diverticulum | 1.69e-28 | 23 |
sac | 1.69e-28 | 23 |
exocrine gland | 4.47e-26 | 25 |
exocrine system | 4.47e-26 | 25 |
trunk mesenchyme | 1.14e-13 | 45 |
epithelial tube | 5.25e-13 | 47 |
abdomen element | 2.13e-12 | 49 |
abdominal segment element | 2.13e-12 | 49 |
abdominal segment of trunk | 2.13e-12 | 49 |
abdomen | 2.13e-12 | 49 |
gut epithelium | 7.75e-11 | 55 |
endocrine gland | 8.97e-10 | 60 |
mesenchyme | 1.40e-09 | 61 |
entire embryonic mesenchyme | 1.40e-09 | 61 |
gland | 7.13e-09 | 65 |
unilaminar epithelium | 1.04e-08 | 66 |
subdivision of trunk | 1.04e-08 | 66 |
endo-epithelium | 3.02e-08 | 69 |
endocrine system | 8.03e-08 | 72 |
extraembryonic membrane | 3.89e-07 | 3 |
extraembryonic structure | 3.89e-07 | 3 |
membranous layer | 3.89e-07 | 3 |
trunk region element | 5.90e-07 | 79 |
foregut | 7.63e-07 | 80 |